Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.28■□□□□ 0.52
NIPAL1Q6NVV3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 AC104417.2-201ENST00000562989 1793 ntBASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 AC004951.3-201ENST00000418645 1148 ntBASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 SNORA78-201ENST00000459373 127 ntBASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.27■□□□□ 0.52
NIPAL1Q6NVV3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
NIPAL1Q6NVV3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 MIR6786-201ENST00000616843 113 ntBASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 FZD10-202ENST00000539839 3282 ntBASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NIPAL1Q6NVV3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 TSPY21P-201ENST00000433481 731 ntBASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 Z85996.1-201ENST00000494644 937 ntBASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 AP003071.4-201ENST00000562276 1284 ntBASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 AC125437.2-201ENST00000625180 2167 ntBASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL1Q6NVV3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.24■□□□□ 0.51
NIPAL1Q6NVV3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms