Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.78-201ENST00000362970 110 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RNA5SP122-201ENST00000384457 108 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RNY1P7-201ENST00000384743 110 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR590-201ENST00000385008 97 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR105-1-201ENST00000385222 81 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR1182-201ENST00000408363 97 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 CKS1BP6-201ENST00000424932 240 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 BX323845.1-201ENST00000432417 179 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RPS29P10-201ENST00000439197 166 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AL691482.1-201ENST00000453255 87 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL610P-201ENST00000463845 291 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL629P-201ENST00000489622 285 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RNA5SP473-201ENST00000516402 125 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-1270P-201ENST00000517128 108 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 HMGB1P40-201ENST00000525121 540 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 CYCSP40-201ENST00000575927 294 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR5009-201ENST00000578736 100 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MIR4505-201ENST00000582238 73 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 SNORD115-40-201ENST00000606510 82 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AC015726.2-201ENST00000620112 122 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AC011944.2-201ENST00000624440 683 ntBASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRTAP3-1Q9BYR8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-888P-201ENST00000363010 101 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.242-201ENST00000364473 110 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 MIR520G-201ENST00000385064 90 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNA5SP339-201ENST00000390987 122 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 HMGN2P8-201ENST00000391458 268 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RN7SKP286-201ENST00000410894 299 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC108075.1-201ENST00000424692 529 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC109327.2-201ENST00000448339 378 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL727P-201ENST00000482164 296 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 PARP4P3-201ENST00000510265 317 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-109P-201ENST00000516364 107 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-184P-201ENST00000516514 107 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC126177.5-201ENST00000549599 178 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC010547.6-201ENST00000571789 193 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 MALAT1.1-201ENST00000618249 95 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AL672167.1-203ENST00000641299 2975 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 MAPK10-349ENST00000641767 3661 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms