RNA–Protein interactions for RNA: ENST00000482164.3

RN7SL727P-201, Transcript of RNA, 7SL, cytoplasmic 727, pseudogene, humanhuman

BASIC

Gene RN7SL727P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL727P-201ENST00000482164 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
RN7SL727P-201ENST00000482164 ABCC9O60706 1549 aa13.07□□□□□ -0.32
RN7SL727P-201ENST00000482164 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
RN7SL727P-201ENST00000482164 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
RN7SL727P-201ENST00000482164 RB1CC1Q8TDY2 1594 aa12.35□□□□□ -0.43
RN7SL727P-201ENST00000482164 NACADO15069 1562 aa12.24□□□□□ -0.45
RN7SL727P-201ENST00000482164 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
RN7SL727P-201ENST00000482164 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
RN7SL727P-201ENST00000482164 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
RN7SL727P-201ENST00000482164 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
RN7SL727P-201ENST00000482164 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
RN7SL727P-201ENST00000482164 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
RN7SL727P-201ENST00000482164 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
RN7SL727P-201ENST00000482164 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
RN7SL727P-201ENST00000482164 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
RN7SL727P-201ENST00000482164 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
RN7SL727P-201ENST00000482164 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
RN7SL727P-201ENST00000482164 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
RN7SL727P-201ENST00000482164 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
RN7SL727P-201ENST00000482164 CUX2O14529 1486 aa11.43□□□□□ -0.58
RN7SL727P-201ENST00000482164 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
RN7SL727P-201ENST00000482164 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
RN7SL727P-201ENST00000482164 HMGXB3Q12766 1538 aa11.23□□□□□ -0.61
RN7SL727P-201ENST00000482164 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
RN7SL727P-201ENST00000482164 NESP48681 1621 aa11.21□□□□□ -0.61
RN7SL727P-201ENST00000482164 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
RN7SL727P-201ENST00000482164 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
RN7SL727P-201ENST00000482164 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
RN7SL727P-201ENST00000482164 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
RN7SL727P-201ENST00000482164 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
RN7SL727P-201ENST00000482164 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
RN7SL727P-201ENST00000482164 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
RN7SL727P-201ENST00000482164 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
RN7SL727P-201ENST00000482164 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
RN7SL727P-201ENST00000482164 WDR62O43379 1518 aa10.97□□□□□ -0.65
RN7SL727P-201ENST00000482164 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
RN7SL727P-201ENST00000482164 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
RN7SL727P-201ENST00000482164 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
RN7SL727P-201ENST00000482164 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
RN7SL727P-201ENST00000482164 WIZO95785 1651 aa10.8□□□□□ -0.68
RN7SL727P-201ENST00000482164 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
RN7SL727P-201ENST00000482164 CFTRP13569 1480 aa10.79□□□□□ -0.68
RN7SL727P-201ENST00000482164 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
RN7SL727P-201ENST00000482164 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
RN7SL727P-201ENST00000482164 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
RN7SL727P-201ENST00000482164 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
RN7SL727P-201ENST00000482164 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
RN7SL727P-201ENST00000482164 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
RN7SL727P-201ENST00000482164 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
RN7SL727P-201ENST00000482164 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
RN7SL727P-201ENST00000482164 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
RN7SL727P-201ENST00000482164 PRDM2Q13029 1718 aa10.65□□□□□ -0.7
RN7SL727P-201ENST00000482164 RSF1Q96T23 1441 aaPredicted RBP10.65□□□□□ -0.7
RN7SL727P-201ENST00000482164 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
RN7SL727P-201ENST00000482164 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
RN7SL727P-201ENST00000482164 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
RN7SL727P-201ENST00000482164 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
RN7SL727P-201ENST00000482164 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
RN7SL727P-201ENST00000482164 CHD1O14646 1710 aa10.55□□□□□ -0.72
RN7SL727P-201ENST00000482164 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
RN7SL727P-201ENST00000482164 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
RN7SL727P-201ENST00000482164 CLASP1Q7Z460 1538 aa10.49□□□□□ -0.73
RN7SL727P-201ENST00000482164 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
RN7SL727P-201ENST00000482164 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
RN7SL727P-201ENST00000482164 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
RN7SL727P-201ENST00000482164 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
RN7SL727P-201ENST00000482164 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
RN7SL727P-201ENST00000482164 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.74
RN7SL727P-201ENST00000482164 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
RN7SL727P-201ENST00000482164 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
RN7SL727P-201ENST00000482164 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
RN7SL727P-201ENST00000482164 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
RN7SL727P-201ENST00000482164 SYNJ1O43426 1573 aa10.34□□□□□ -0.75
RN7SL727P-201ENST00000482164 CUX1P39880 1505 aa10.33□□□□□ -0.76
RN7SL727P-201ENST00000482164 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
RN7SL727P-201ENST00000482164 SOGA1O94964 1423 aa10.33□□□□□ -0.76
RN7SL727P-201ENST00000482164 SYNJ2O15056 1496 aa10.31□□□□□ -0.76
RN7SL727P-201ENST00000482164 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
RN7SL727P-201ENST00000482164 GAPVD1Q14C86 1478 aa10.3□□□□□ -0.76
RN7SL727P-201ENST00000482164 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
RN7SL727P-201ENST00000482164 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
RN7SL727P-201ENST00000482164 FBLN2P98095 1184 aa10.27□□□□□ -0.77
RN7SL727P-201ENST00000482164 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
RN7SL727P-201ENST00000482164 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
RN7SL727P-201ENST00000482164 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
RN7SL727P-201ENST00000482164 KIF13AQ9H1H9 1805 aa10.23□□□□□ -0.77
RN7SL727P-201ENST00000482164 NUP160Q12769 1436 aa10.23□□□□□ -0.77
RN7SL727P-201ENST00000482164 CHMP7Q8WUX9 453 aaPredicted RBP10.21□□□□□ -0.77
RN7SL727P-201ENST00000482164 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
RN7SL727P-201ENST00000482164 ADAMTS12P58397 1594 aa10.19□□□□□ -0.78
RN7SL727P-201ENST00000482164 GRIN2AQ12879 1464 aa10.19□□□□□ -0.78
RN7SL727P-201ENST00000482164 AEBP2Q6ZN18 517 aaPredicted RBP10.19□□□□□ -0.78
RN7SL727P-201ENST00000482164 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
RN7SL727P-201ENST00000482164 FHAD1B1AJZ9 1412 aa10.09□□□□□ -0.79
RN7SL727P-201ENST00000482164 MAPKBP1O60336 1514 aa10.09□□□□□ -0.79
RN7SL727P-201ENST00000482164 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
RN7SL727P-201ENST00000482164 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
RN7SL727P-201ENST00000482164 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
RN7SL727P-201ENST00000482164 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
RN7SL727P-201ENST00000482164 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms