RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
CTSS-201ENST00000368985 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
CTSS-201ENST00000368985 MYO15BQ96JP2 1530 aa10.39□□□□□ -0.75
CTSS-201ENST00000368985 NACADO15069 1562 aa10.27□□□□□ -0.77
CTSS-201ENST00000368985 ABCC9O60706 1549 aa10.25□□□□□ -0.77
CTSS-201ENST00000368985 RB1CC1Q8TDY2 1594 aa10.25□□□□□ -0.77
CTSS-201ENST00000368985 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
CTSS-201ENST00000368985 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
CTSS-201ENST00000368985 UNC13AQ9UPW8 1703 aa10.07□□□□□ -0.8
CTSS-201ENST00000368985 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
CTSS-201ENST00000368985 BICRAQ9NZM4 1560 aa9.9□□□□□ -0.82
CTSS-201ENST00000368985 EIF4G1Q04637 1599 aaKnown RBP9.59□□□□□ -0.87
CTSS-201ENST00000368985 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
CTSS-201ENST00000368985 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
CTSS-201ENST00000368985 PEG3Q9GZU2 1588 aa9.48□□□□□ -0.89
CTSS-201ENST00000368985 HMGXB3Q12766 1538 aa9.44□□□□□ -0.9
CTSS-201ENST00000368985 SMARCA2P51531 1590 aa9.44□□□□□ -0.9
CTSS-201ENST00000368985 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
CTSS-201ENST00000368985 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.91
CTSS-201ENST00000368985 NCAPD3P42695 1498 aa9.37□□□□□ -0.91
CTSS-201ENST00000368985 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
CTSS-201ENST00000368985 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
CTSS-201ENST00000368985 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTSS-201ENST00000368985 CUX2O14529 1486 aa9.28□□□□□ -0.92
CTSS-201ENST00000368985 LAMC3Q9Y6N6 1575 aa9.23□□□□□ -0.93
CTSS-201ENST00000368985 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
CTSS-201ENST00000368985 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
CTSS-201ENST00000368985 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
CTSS-201ENST00000368985 DCAF8L2P0C7V8 631 aa9.14□□□□□ -0.95
CTSS-201ENST00000368985 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
CTSS-201ENST00000368985 WDR62O43379 1518 aa9.05□□□□□ -0.96
CTSS-201ENST00000368985 TOP2AP11388 1531 aaKnown RBP9.04□□□□□ -0.96
CTSS-201ENST00000368985 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
CTSS-201ENST00000368985 KIF21AQ7Z4S6 1674 aa9.03□□□□□ -0.96
CTSS-201ENST00000368985 WDR97A6NE52 1622 aa9.01□□□□□ -0.97
CTSS-201ENST00000368985 PDS5BQ9NTI5 1447 aa8.97□□□□□ -0.97
CTSS-201ENST00000368985 WIZO95785 1651 aa8.95□□□□□ -0.98
CTSS-201ENST00000368985 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
CTSS-201ENST00000368985 CFTRP13569 1480 aa8.94□□□□□ -0.98
CTSS-201ENST00000368985 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
CTSS-201ENST00000368985 ERCC6Q03468 1493 aa8.92□□□□□ -0.98
CTSS-201ENST00000368985 ABCC8Q09428 1581 aa8.89□□□□□ -0.99
CTSS-201ENST00000368985 RSF1Q96T23 1441 aaPredicted RBP8.86□□□□□ -0.99
CTSS-201ENST00000368985 CEP164Q9UPV0 1460 aa8.85□□□□□ -0.99
CTSS-201ENST00000368985 NESP48681 1621 aa8.85□□□□□ -0.99
CTSS-201ENST00000368985 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
CTSS-201ENST00000368985 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
CTSS-201ENST00000368985 FANCD2Q9BXW9 1451 aa8.8□□□□□ -1
CTSS-201ENST00000368985 IFT140Q96RY7 1462 aa8.77□□□□□ -1.01
CTSS-201ENST00000368985 TARBP1Q13395 1621 aaKnown RBP8.75□□□□□ -1.01
CTSS-201ENST00000368985 URB2Q14146 1524 aaKnown RBP8.75□□□□□ -1.01
CTSS-201ENST00000368985 CHIC1Q5VXU3 224 aa8.74□□□□□ -1.01
CTSS-201ENST00000368985 CCDC88BA6NC98 1476 aa8.71□□□□□ -1.01
CTSS-201ENST00000368985 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
CTSS-201ENST00000368985 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
CTSS-201ENST00000368985 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
CTSS-201ENST00000368985 ABCA5Q8WWZ7 1642 aa8.63□□□□□ -1.03
CTSS-201ENST00000368985 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
CTSS-201ENST00000368985 CHD1O14646 1710 aa8.62□□□□□ -1.03
CTSS-201ENST00000368985 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
CTSS-201ENST00000368985 MAGI1Q96QZ7 1491 aaPredicted RBP8.61□□□□□ -1.03
CTSS-201ENST00000368985 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
CTSS-201ENST00000368985 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
CTSS-201ENST00000368985 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
CTSS-201ENST00000368985 TOP2BQ02880 1626 aa8.57□□□□□ -1.04
CTSS-201ENST00000368985 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
CTSS-201ENST00000368985 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
CTSS-201ENST00000368985 SHROOM2Q13796 1616 aa8.57□□□□□ -1.04
CTSS-201ENST00000368985 SYNJ1O43426 1573 aa8.56□□□□□ -1.04
CTSS-201ENST00000368985 CUX1P39880 1505 aa8.54□□□□□ -1.04
CTSS-201ENST00000368985 ERICH3Q5RHP9 1530 aa8.53□□□□□ -1.04
CTSS-201ENST00000368985 ADAMTS12P58397 1594 aa8.51□□□□□ -1.05
CTSS-201ENST00000368985 GRIN2BQ13224 1484 aa8.5□□□□□ -1.05
CTSS-201ENST00000368985 AEBP2Q6ZN18 517 aaPredicted RBP8.5□□□□□ -1.05
CTSS-201ENST00000368985 SYNJ2O15056 1496 aa8.5□□□□□ -1.05
CTSS-201ENST00000368985 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
CTSS-201ENST00000368985 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
CTSS-201ENST00000368985 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
CTSS-201ENST00000368985 CUL7Q14999 1698 aa8.48□□□□□ -1.05
CTSS-201ENST00000368985 NUP160Q12769 1436 aa8.44□□□□□ -1.06
CTSS-201ENST00000368985 OSCARQ8IYS5 282 aa8.44□□□□□ -1.06
CTSS-201ENST00000368985 SUPT5HO00267 1087 aaKnown RBP8.44□□□□□ -1.06
CTSS-201ENST00000368985 SOGA1O94964 1423 aa8.43□□□□□ -1.06
CTSS-201ENST00000368985 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
CTSS-201ENST00000368985 GAPVD1Q14C86 1478 aa8.4□□□□□ -1.06
CTSS-201ENST00000368985 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
CTSS-201ENST00000368985 ARAP1Q96P48 1450 aa8.39□□□□□ -1.07
CTSS-201ENST00000368985 WRNQ14191 1432 aaPredicted RBP eCLIP8.38□□□□□ -1.07
CTSS-201ENST00000368985 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
CTSS-201ENST00000368985 FHAD1B1AJZ9 1412 aa8.38□□□□□ -1.07
CTSS-201ENST00000368985 CEP170Q5SW79 1584 aa8.37□□□□□ -1.07
CTSS-201ENST00000368985 RAD54L2Q9Y4B4 1467 aa8.35□□□□□ -1.07
CTSS-201ENST00000368985 AQRO60306 1485 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTSS-201ENST00000368985 MAPKBP1O60336 1514 aa8.33□□□□□ -1.08
CTSS-201ENST00000368985 KIF13AQ9H1H9 1805 aa8.3□□□□□ -1.08
CTSS-201ENST00000368985 GLI2P10070 1586 aa8.28□□□□□ -1.08
CTSS-201ENST00000368985 CTTNBP2Q8WZ74 1663 aa8.27□□□□□ -1.09
CTSS-201ENST00000368985 UHRF1BP1LA0JNW5 1464 aa8.27□□□□□ -1.09
CTSS-201ENST00000368985 KIAA0586Q9BVV6 1533 aa8.26□□□□□ -1.09
CTSS-201ENST00000368985 UGGT2Q9NYU1 1516 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms