Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN5P54829 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN5P54829 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
PTPN5P54829 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN5P54829 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTPN5P54829 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN5P54829 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN5P54829 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN5P54829 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN5P54829 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN5P54829 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PTPN5P54829 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN5P54829 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PTPN5P54829 AC004817.4-201ENST00000602396 3625 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTPN5P54829 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 SNORA70C-201ENST00000384538 135 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 SNORA68.2-201ENST00000391263 128 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 AL358232.1-201ENST00000448030 501 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 AC117454.1-201ENST00000491120 168 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 AC091826.1-201ENST00000514065 313 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 RNA5SP230-201ENST00000517039 122 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
PTPN5P54829 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN5P54829 MUC2-202ENST00000613187 4845 ntBASIC5.12□□□□□ -1.59
PTPN5P54829 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN5P54829 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN5P54829 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN5P54829 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTPN5P54829 AC104623.2-202ENST00000623477 4002 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN5P54829 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN5P54829 RNA5SP496-201ENST00000391240 109 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 MIR1250-201ENST00000408098 113 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 RPL23AP62-201ENST00000463396 453 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 SNRPGP7-201ENST00000469016 106 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN5P54829 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN5P54829 SCARNA15.2-201ENST00000516409 127 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN5P54829 AC097639.2-201ENST00000603159 172 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 AP005432.2-201ENST00000608162 586 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 IGLL4P-201ENST00000614590 133 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 AL138880.2-201ENST00000616214 239 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 AC006133.1-201ENST00000617106 264 ntBASIC5.11□□□□□ -1.59
PTPN5P54829 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTPN5P54829 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN5P54829 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN5P54829 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PTPN5P54829 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN5P54829 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTPN5P54829 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN5P54829 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PTPN5P54829 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PTPN5P54829 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 RNU1-94P-201ENST00000362627 173 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 Y_RNA.73-201ENST00000362910 113 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 RNA5SP387-201ENST00000364226 106 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 Y_RNA.313-201ENST00000365095 103 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 MIR544A-201ENST00000384855 91 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 AL500522.2-201ENST00000448562 343 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 RNA5SP153-201ENST00000516498 76 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 RNU6-107P-201ENST00000516643 102 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN5P54829 AC068339.1-201ENST00000526965 141 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.1□□□□□ -1.59
PTPN5P54829 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 AL359198.2-201ENST00000611836 194 ntBASIC5.1□□□□□ -1.59
PTPN5P54829 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PTPN5P54829 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
PTPN5P54829 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PTPN5P54829 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN5P54829 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN5P54829 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN5P54829 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN5P54829 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN5P54829 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN5P54829 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN5P54829 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN5P54829 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN5P54829 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms