RNA–Protein interactions for RNA: ENST00000517039.1

RNA5SP230-201, Transcript of RNA, 5S ribosomal pseudogene 230, humanhuman

BASIC

Gene RNA5SP230, Length 122 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP230-201ENST00000517039 AEBP2Q6ZN18 517 aaPredicted RBP10.31□□□□□ -0.76
RNA5SP230-201ENST00000517039 NISCHQ9Y2I1 1504 aa10.05□□□□□ -0.8
RNA5SP230-201ENST00000517039 CHIC1Q5VXU3 224 aa9.53□□□□□ -0.88
RNA5SP230-201ENST00000517039 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
RNA5SP230-201ENST00000517039 HRCP23327 699 aa9.08□□□□□ -0.96
RNA5SP230-201ENST00000517039 POTEDQ86YR6 584 aa9□□□□□ -0.97
RNA5SP230-201ENST00000517039 MYT1Q01538 1121 aa8.94□□□□□ -0.98
RNA5SP230-201ENST00000517039 SENP3Q9H4L4 574 aaPredicted RBP8.82□□□□□ -1
RNA5SP230-201ENST00000517039 DCAF1Q9Y4B6 1507 aa8.81□□□□□ -1
RNA5SP230-201ENST00000517039 ZEB1P37275 1124 aaPredicted RBP8.71□□□□□ -1.02
RNA5SP230-201ENST00000517039 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
RNA5SP230-201ENST00000517039 PHF23Q9BUL5 403 aaPredicted RBP8.64□□□□□ -1.03
RNA5SP230-201ENST00000517039 PCGF6Q9BYE7 350 aa8.62□□□□□ -1.03
RNA5SP230-201ENST00000517039 MYO15BQ96JP2 1530 aa8.61□□□□□ -1.03
RNA5SP230-201ENST00000517039 ZCCHC6Q5VYS8 1495 aaKnown RBP8.61□□□□□ -1.03
RNA5SP230-201ENST00000517039 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
RNA5SP230-201ENST00000517039 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
RNA5SP230-201ENST00000517039 SUPT5HO00267 1087 aaKnown RBP8.52□□□□□ -1.05
RNA5SP230-201ENST00000517039 TTBK1Q5TCY1 1321 aaPredicted RBP8.5□□□□□ -1.05
RNA5SP230-201ENST00000517039 SCAF1Q9H7N4 1312 aaKnown RBP8.49□□□□□ -1.05
RNA5SP230-201ENST00000517039 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
RNA5SP230-201ENST00000517039 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
RNA5SP230-201ENST00000517039 FOXD1Q16676 465 aa8.35□□□□□ -1.07
RNA5SP230-201ENST00000517039 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
RNA5SP230-201ENST00000517039 CLSPNQ9HAW4 1339 aa8.25□□□□□ -1.09
RNA5SP230-201ENST00000517039 LOC105371045A0A1W2PR82 267 aa8.23□□□□□ -1.09
RNA5SP230-201ENST00000517039 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
RNA5SP230-201ENST00000517039 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
RNA5SP230-201ENST00000517039 ABCC9O60706 1549 aa8.16□□□□□ -1.1
RNA5SP230-201ENST00000517039 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
RNA5SP230-201ENST00000517039 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
RNA5SP230-201ENST00000517039 WRNQ14191 1432 aaPredicted RBP eCLIP8.12□□□□□ -1.11
RNA5SP230-201ENST00000517039 RB1CC1Q8TDY2 1594 aa8.09□□□□□ -1.11
RNA5SP230-201ENST00000517039 RSF1Q96T23 1441 aaPredicted RBP8.05□□□□□ -1.12
RNA5SP230-201ENST00000517039 ZNF316A6NFI3 1004 aaPredicted RBP8.04□□□□□ -1.12
RNA5SP230-201ENST00000517039 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
RNA5SP230-201ENST00000517039 MSH5O43196 834 aa8.01□□□□□ -1.13
RNA5SP230-201ENST00000517039 ANP32EQ9BTT0 268 aa7.98□□□□□ -1.13
RNA5SP230-201ENST00000517039 EEA1Q15075 1411 aa7.95□□□□□ -1.14
RNA5SP230-201ENST00000517039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.93□□□□□ -1.14
RNA5SP230-201ENST00000517039 BCL11AQ9H165 835 aa7.91□□□□□ -1.14
RNA5SP230-201ENST00000517039 TNIKQ9UKE5 1360 aa7.91□□□□□ -1.14
RNA5SP230-201ENST00000517039 EIF4G1Q04637 1599 aaKnown RBP7.88□□□□□ -1.15
RNA5SP230-201ENST00000517039 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
RNA5SP230-201ENST00000517039 SUPT16HQ9Y5B9 1047 aaKnown RBP7.86□□□□□ -1.15
RNA5SP230-201ENST00000517039 MIER1Q8N108 512 aa7.85□□□□□ -1.15
RNA5SP230-201ENST00000517039 TSHZ2Q9NRE2 1034 aa7.84□□□□□ -1.15
RNA5SP230-201ENST00000517039 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
RNA5SP230-201ENST00000517039 DCAF8L2P0C7V8 631 aa7.81□□□□□ -1.16
RNA5SP230-201ENST00000517039 BAZ1AQ9NRL2 1556 aaPredicted RBP7.8□□□□□ -1.16
RNA5SP230-201ENST00000517039 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
RNA5SP230-201ENST00000517039 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
RNA5SP230-201ENST00000517039 GOLGA3Q08378 1498 aa7.76□□□□□ -1.17
RNA5SP230-201ENST00000517039 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
RNA5SP230-201ENST00000517039 NACADO15069 1562 aa7.73□□□□□ -1.17
RNA5SP230-201ENST00000517039 CSRNP3Q8WYN3 585 aa7.73□□□□□ -1.17
RNA5SP230-201ENST00000517039 CUX2O14529 1486 aa7.73□□□□□ -1.17
RNA5SP230-201ENST00000517039 BAZ1BQ9UIG0 1483 aaKnown RBP7.73□□□□□ -1.17
RNA5SP230-201ENST00000517039 MROH2BQ7Z745 1585 aa7.72□□□□□ -1.17
RNA5SP230-201ENST00000517039 FANCIQ9NVI1 1328 aa7.72□□□□□ -1.17
RNA5SP230-201ENST00000517039 KIF21BO75037 1637 aa7.71□□□□□ -1.17
RNA5SP230-201ENST00000517039 SCRIBQ14160 1630 aa7.71□□□□□ -1.17
RNA5SP230-201ENST00000517039 VPS8Q8N3P4 1428 aa7.7□□□□□ -1.18
RNA5SP230-201ENST00000517039 CEP164Q9UPV0 1460 aa7.7□□□□□ -1.18
RNA5SP230-201ENST00000517039 TOP2AP11388 1531 aaKnown RBP7.7□□□□□ -1.18
RNA5SP230-201ENST00000517039 ERICH6BQ5W0A0 696 aa7.69□□□□□ -1.18
RNA5SP230-201ENST00000517039 DHX57Q6P158 1386 aaKnown RBP7.68□□□□□ -1.18
RNA5SP230-201ENST00000517039 CCDC88BA6NC98 1476 aa7.67□□□□□ -1.18
RNA5SP230-201ENST00000517039 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
RNA5SP230-201ENST00000517039 CECR2Q9BXF3 1484 aa7.66□□□□□ -1.18
RNA5SP230-201ENST00000517039 CCER2I3L3R5 266 aa7.65□□□□□ -1.18
RNA5SP230-201ENST00000517039 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
RNA5SP230-201ENST00000517039 WIZO95785 1651 aa7.64□□□□□ -1.19
RNA5SP230-201ENST00000517039 CLIP1P30622 1438 aa7.63□□□□□ -1.19
RNA5SP230-201ENST00000517039 PRKCSHP14314 528 aaPredicted RBP7.63□□□□□ -1.19
RNA5SP230-201ENST00000517039 RRBP1Q9P2E9 1410 aaKnown RBP7.62□□□□□ -1.19
RNA5SP230-201ENST00000517039 APLP2Q06481 763 aa7.62□□□□□ -1.19
RNA5SP230-201ENST00000517039 SOGA1O94964 1423 aa7.61□□□□□ -1.19
RNA5SP230-201ENST00000517039 NEFLP07196 543 aa7.61□□□□□ -1.19
RNA5SP230-201ENST00000517039 PIAS4Q8N2W9 510 aaPredicted RBP7.61□□□□□ -1.19
RNA5SP230-201ENST00000517039 SMARCA2P51531 1590 aa7.61□□□□□ -1.19
RNA5SP230-201ENST00000517039 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
RNA5SP230-201ENST00000517039 ERICH3Q5RHP9 1530 aa7.57□□□□□ -1.2
RNA5SP230-201ENST00000517039 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
RNA5SP230-201ENST00000517039 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
RNA5SP230-201ENST00000517039 FKBP8Q14318 412 aa7.55□□□□□ -1.2
RNA5SP230-201ENST00000517039 HNRNPUL2Q1KMD3 747 aaKnown RBP7.55□□□□□ -1.2
RNA5SP230-201ENST00000517039 SMARCA4P51532 1647 aa7.53□□□□□ -1.2
RNA5SP230-201ENST00000517039 PEG3Q9GZU2 1588 aa7.53□□□□□ -1.2
RNA5SP230-201ENST00000517039 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
RNA5SP230-201ENST00000517039 CDK11AQ9UQ88 783 aaPredicted RBP7.52□□□□□ -1.21
RNA5SP230-201ENST00000517039 EHMT2Q96KQ7 1210 aa7.51□□□□□ -1.21
RNA5SP230-201ENST00000517039 RUSC2Q8N2Y8 1516 aa7.51□□□□□ -1.21
RNA5SP230-201ENST00000517039 SYNJ1O43426 1573 aa7.5□□□□□ -1.21
RNA5SP230-201ENST00000517039 CCNB3Q8WWL7 1395 aa7.48□□□□□ -1.21
RNA5SP230-201ENST00000517039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNA5SP230-201ENST00000517039 MAPKBP1O60336 1514 aa7.48□□□□□ -1.21
RNA5SP230-201ENST00000517039 PRXQ9BXM0 1461 aa7.48□□□□□ -1.21
RNA5SP230-201ENST00000517039 ANP32CO43423 234 aa7.46□□□□□ -1.22
RNA5SP230-201ENST00000517039 DEKP35659 375 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms