Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU6-377P-201ENST00000515965 102 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 SCARNA14-201ENST00000516903 136 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 RN7SKP289-201ENST00000517244 295 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AC034114.1-201ENST00000520293 285 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 HSPE1P20-201ENST00000538133 289 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AMZ2P1-203ENST00000565833 850 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 MIR5685-201ENST00000579080 79 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 AL161912.2-201ENST00000565707 3007 ntBASIC3.33□□□□□ -1.88
CPEB3Q8NE35 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CPEB3Q8NE35 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 OR56A5-201ENST00000340110 738 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNU6-50P-201ENST00000362356 103 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 Y_RNA.19-201ENST00000362462 99 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNA5SP295-201ENST00000362655 121 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNU6-227P-201ENST00000362865 103 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNU6-78P-201ENST00000362897 107 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNU5E-7P-201ENST00000365290 117 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 Y_RNA.350-201ENST00000365409 98 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 Y_RNA.518-201ENST00000384552 113 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 MIR30B-201ENST00000384850 88 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 MIR628-201ENST00000385229 95 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 MIR325-201ENST00000385260 98 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 HLFP1-201ENST00000402375 499 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNU2-38P-201ENST00000410856 79 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 MTCO3P29-201ENST00000432119 779 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 SNORA71B-202ENST00000439232 272 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RPEP5-201ENST00000441137 268 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 MTND1P19-201ENST00000511780 315 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RNA5SP143-201ENST00000516936 115 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AL590705.4-201ENST00000532209 134 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 CYCSP39-201ENST00000565821 309 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RPS29P30-201ENST00000600975 111 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AC006077.1-201ENST00000604746 343 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AL137849.1-201ENST00000604767 169 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 AL672296.1-201ENST00000427780 2158 ntBASIC3.32□□□□□ -1.88
CPEB3Q8NE35 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPEB3Q8NE35 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 Y_RNA.105-201ENST00000363182 111 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RN7SKP280-201ENST00000364196 304 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 Z98749.2-208ENST00000381646 500 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNU6-611P-201ENST00000384276 104 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 MIR554-201ENST00000384874 96 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNU6ATAC-201ENST00000408749 126 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RN7SKP202-201ENST00000410439 330 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNU6-130P-201ENST00000411112 103 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RPL21P104-201ENST00000464143 478 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RPL23AP14-201ENST00000468281 468 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 TRBV12-2-201ENST00000489763 344 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC074250.1-201ENST00000511117 192 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNA5SP208-201ENST00000516156 78 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 SNORA40.15-201ENST00000516884 107 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 RNU6-703P-201ENST00000516946 107 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC130454.1-201ENST00000622948 401 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 AC027309.3-201ENST00000623419 351 ntBASIC3.31□□□□□ -1.88
CPEB3Q8NE35 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CPEB3Q8NE35 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPEB3Q8NE35 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPEB3Q8NE35 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CPEB3Q8NE35 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.3□□□□□ -1.88
CPEB3Q8NE35 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
CPEB3Q8NE35 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPEB3Q8NE35 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms