RNA–Protein interactions for RNA: ENST00000410439.1

RN7SKP202-201, Transcript of RNA, 7SK small nuclear pseudogene 202, humanhuman

BASIC

Gene RN7SKP202, Length 330 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP202-201ENST00000410439 NISCHQ9Y2I1 1504 aa10.15□□□□□ -0.78
RN7SKP202-201ENST00000410439 ABCC9O60706 1549 aa9.79□□□□□ -0.84
RN7SKP202-201ENST00000410439 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
RN7SKP202-201ENST00000410439 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
RN7SKP202-201ENST00000410439 CHIC1Q5VXU3 224 aa9.53□□□□□ -0.88
RN7SKP202-201ENST00000410439 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
RN7SKP202-201ENST00000410439 DNAJC5Q9H3Z4 198 aa9.18□□□□□ -0.94
RN7SKP202-201ENST00000410439 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
RN7SKP202-201ENST00000410439 RB1CC1Q8TDY2 1594 aa9.08□□□□□ -0.96
RN7SKP202-201ENST00000410439 DCAF8L2P0C7V8 631 aa8.99□□□□□ -0.97
RN7SKP202-201ENST00000410439 NACADO15069 1562 aa8.9□□□□□ -0.98
RN7SKP202-201ENST00000410439 CECR2Q9BXF3 1484 aa8.86□□□□□ -0.99
RN7SKP202-201ENST00000410439 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
RN7SKP202-201ENST00000410439 UNC13AQ9UPW8 1703 aa8.77□□□□□ -1.01
RN7SKP202-201ENST00000410439 CC2D2AQ9P2K1 1620 aa8.76□□□□□ -1.01
RN7SKP202-201ENST00000410439 TRIM41Q8WV44 630 aa8.66□□□□□ -1.02
RN7SKP202-201ENST00000410439 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
RN7SKP202-201ENST00000410439 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
RN7SKP202-201ENST00000410439 CUX2O14529 1486 aa8.6□□□□□ -1.03
RN7SKP202-201ENST00000410439 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
RN7SKP202-201ENST00000410439 ERCC6Q03468 1493 aa8.51□□□□□ -1.05
RN7SKP202-201ENST00000410439 SCRIBQ14160 1630 aa8.47□□□□□ -1.05
RN7SKP202-201ENST00000410439 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.06
RN7SKP202-201ENST00000410439 DCAF1Q9Y4B6 1507 aa8.32□□□□□ -1.08
RN7SKP202-201ENST00000410439 ZCCHC6Q5VYS8 1495 aaKnown RBP8.27□□□□□ -1.09
RN7SKP202-201ENST00000410439 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 NCAPD3P42695 1498 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 NESP48681 1621 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
RN7SKP202-201ENST00000410439 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
RN7SKP202-201ENST00000410439 SMARCA2P51531 1590 aa8.16□□□□□ -1.1
RN7SKP202-201ENST00000410439 PDS5BQ9NTI5 1447 aa8.15□□□□□ -1.1
RN7SKP202-201ENST00000410439 ATAD2BQ9ULI0 1458 aa8.14□□□□□ -1.11
RN7SKP202-201ENST00000410439 SENP3Q9H4L4 574 aaPredicted RBP8.14□□□□□ -1.11
RN7SKP202-201ENST00000410439 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 CYB5RLQ6IPT4 315 aa8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
RN7SKP202-201ENST00000410439 KIF21AQ7Z4S6 1674 aa8.07□□□□□ -1.12
RN7SKP202-201ENST00000410439 BAZ1BQ9UIG0 1483 aaKnown RBP8.06□□□□□ -1.12
RN7SKP202-201ENST00000410439 MRC2Q9UBG0 1479 aa8.05□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3CA6NJZ7 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3BA6NNM3 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3Q9UFD9 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 CADPSQ9ULU8 1353 aa8.01□□□□□ -1.13
RN7SKP202-201ENST00000410439 WDR62O43379 1518 aa8□□□□□ -1.13
RN7SKP202-201ENST00000410439 ARHGEF11O15085 1522 aa7.98□□□□□ -1.13
RN7SKP202-201ENST00000410439 SMARCA4P51532 1647 aa7.98□□□□□ -1.13
RN7SKP202-201ENST00000410439 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
RN7SKP202-201ENST00000410439 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
RN7SKP202-201ENST00000410439 FANCD2Q9BXW9 1451 aa7.89□□□□□ -1.15
RN7SKP202-201ENST00000410439 FBLN2P98095 1184 aa7.89□□□□□ -1.15
RN7SKP202-201ENST00000410439 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
RN7SKP202-201ENST00000410439 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
RN7SKP202-201ENST00000410439 PLPPR3Q6T4P5 718 aa7.83□□□□□ -1.16
RN7SKP202-201ENST00000410439 URB2Q14146 1524 aaKnown RBP7.82□□□□□ -1.16
RN7SKP202-201ENST00000410439 RSF1Q96T23 1441 aaPredicted RBP7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
RN7SKP202-201ENST00000410439 CFTRP13569 1480 aa7.77□□□□□ -1.17
RN7SKP202-201ENST00000410439 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
RN7SKP202-201ENST00000410439 AQRO60306 1485 aaKnown RBP eCLIP7.73□□□□□ -1.17
RN7SKP202-201ENST00000410439 CHD1O14646 1710 aa7.72□□□□□ -1.17
RN7SKP202-201ENST00000410439 EIF4G3O43432 1585 aaKnown RBP7.7□□□□□ -1.18
RN7SKP202-201ENST00000410439 KDM4FA0A1W2PPD8 638 aa7.69□□□□□ -1.18
RN7SKP202-201ENST00000410439 WIZO95785 1651 aa7.69□□□□□ -1.18
RN7SKP202-201ENST00000410439 TOPBP1Q92547 1522 aa7.68□□□□□ -1.18
RN7SKP202-201ENST00000410439 ABCC8Q09428 1581 aa7.67□□□□□ -1.18
RN7SKP202-201ENST00000410439 GAPVD1Q14C86 1478 aa7.66□□□□□ -1.18
RN7SKP202-201ENST00000410439 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
RN7SKP202-201ENST00000410439 TDRD9Q8NDG6 1382 aaKnown RBP7.63□□□□□ -1.19
RN7SKP202-201ENST00000410439 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 FAM69CQ0P6D2 419 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 FBXO41Q8TF61 875 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 NPM1P06748 294 aaKnown RBP eCLIP7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 SNAPC4Q5SXM2 1469 aa7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 SOGA1O94964 1423 aa7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 TARBP1Q13395 1621 aaKnown RBP7.59□□□□□ -1.19
RN7SKP202-201ENST00000410439 DNMBPQ6XZF7 1577 aa7.59□□□□□ -1.2
RN7SKP202-201ENST00000410439 RAD54L2Q9Y4B4 1467 aa7.57□□□□□ -1.2
RN7SKP202-201ENST00000410439 POLA1P09884 1462 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 MAGI1Q96QZ7 1491 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 PRDM2Q13029 1718 aa7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
RN7SKP202-201ENST00000410439 TOP2AP11388 1531 aaKnown RBP7.55□□□□□ -1.2
RN7SKP202-201ENST00000410439 GRIN2BQ13224 1484 aa7.54□□□□□ -1.2
RN7SKP202-201ENST00000410439 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
RN7SKP202-201ENST00000410439 FOXD1Q16676 465 aa7.53□□□□□ -1.2
RN7SKP202-201ENST00000410439 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
RN7SKP202-201ENST00000410439 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.21
RN7SKP202-201ENST00000410439 KDM6BO15054 1643 aa7.52□□□□□ -1.21
RN7SKP202-201ENST00000410439 KIF13AQ9H1H9 1805 aa7.51□□□□□ -1.21
RN7SKP202-201ENST00000410439 SOCS7O14512 581 aa7.5□□□□□ -1.21
RN7SKP202-201ENST00000410439 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
RN7SKP202-201ENST00000410439 ABCC10Q5T3U5 1492 aa7.49□□□□□ -1.21
RN7SKP202-201ENST00000410439 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
RN7SKP202-201ENST00000410439 ADGRL1O94910 1474 aa7.48□□□□□ -1.21
RN7SKP202-201ENST00000410439 FGD5Q6ZNL6 1462 aa7.46□□□□□ -1.22
RN7SKP202-201ENST00000410439 CEP170Q5SW79 1584 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms