RNA–Protein interactions for RNA: ENST00000410856.1

RNU2-38P-201, Transcript of RNA, U2 small nuclear 38, pseudogene, humanhuman

BASIC

Gene RNU2-38P, Length 79 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-38P-201ENST00000410856 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
RNU2-38P-201ENST00000410856 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
RNU2-38P-201ENST00000410856 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
RNU2-38P-201ENST00000410856 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
RNU2-38P-201ENST00000410856 FOXD1Q16676 465 aa15.26■□□□□ 0.03
RNU2-38P-201ENST00000410856 MSH5O43196 834 aa14.48□□□□□ -0.09
RNU2-38P-201ENST00000410856 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
RNU2-38P-201ENST00000410856 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
RNU2-38P-201ENST00000410856 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
RNU2-38P-201ENST00000410856 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
RNU2-38P-201ENST00000410856 ADRA2BP18089 450 aa14.01□□□□□ -0.17
RNU2-38P-201ENST00000410856 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
RNU2-38P-201ENST00000410856 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
RNU2-38P-201ENST00000410856 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
RNU2-38P-201ENST00000410856 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
RNU2-38P-201ENST00000410856 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
RNU2-38P-201ENST00000410856 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
RNU2-38P-201ENST00000410856 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
RNU2-38P-201ENST00000410856 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
RNU2-38P-201ENST00000410856 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
RNU2-38P-201ENST00000410856 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
RNU2-38P-201ENST00000410856 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
RNU2-38P-201ENST00000410856 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
RNU2-38P-201ENST00000410856 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
RNU2-38P-201ENST00000410856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNU2-38P-201ENST00000410856 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
RNU2-38P-201ENST00000410856 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
RNU2-38P-201ENST00000410856 CAPN15O75808 1086 aa11.45□□□□□ -0.58
RNU2-38P-201ENST00000410856 DSG3P32926 999 aa11.41□□□□□ -0.58
RNU2-38P-201ENST00000410856 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
RNU2-38P-201ENST00000410856 APLP2Q06481 763 aa11.34□□□□□ -0.59
RNU2-38P-201ENST00000410856 KCNA4P22459 653 aa11.32□□□□□ -0.6
RNU2-38P-201ENST00000410856 POTEHQ6S545 545 aa11.28□□□□□ -0.6
RNU2-38P-201ENST00000410856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
RNU2-38P-201ENST00000410856 SLC4A2P04920 1241 aa11.25□□□□□ -0.61
RNU2-38P-201ENST00000410856 HNRNPUL2Q1KMD3 747 aaKnown RBP11.25□□□□□ -0.61
RNU2-38P-201ENST00000410856 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
RNU2-38P-201ENST00000410856 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
RNU2-38P-201ENST00000410856 ABCB7O75027 752 aa11.14□□□□□ -0.63
RNU2-38P-201ENST00000410856 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
RNU2-38P-201ENST00000410856 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
RNU2-38P-201ENST00000410856 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
RNU2-38P-201ENST00000410856 POLA2Q14181 598 aa10.84□□□□□ -0.67
RNU2-38P-201ENST00000410856 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
RNU2-38P-201ENST00000410856 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
RNU2-38P-201ENST00000410856 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
RNU2-38P-201ENST00000410856 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
RNU2-38P-201ENST00000410856 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
RNU2-38P-201ENST00000410856 ATF5Q9Y2D1 282 aaPredicted RBP10.58□□□□□ -0.72
RNU2-38P-201ENST00000410856 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
RNU2-38P-201ENST00000410856 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
RNU2-38P-201ENST00000410856 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
RNU2-38P-201ENST00000410856 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
RNU2-38P-201ENST00000410856 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
RNU2-38P-201ENST00000410856 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
RNU2-38P-201ENST00000410856 ZBTB22O15209 634 aa10.36□□□□□ -0.75
RNU2-38P-201ENST00000410856 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNU2-38P-201ENST00000410856 HAX1O00165 279 aa10.33□□□□□ -0.76
RNU2-38P-201ENST00000410856 FBLN2P98095 1184 aa10.33□□□□□ -0.76
RNU2-38P-201ENST00000410856 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
RNU2-38P-201ENST00000410856 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
RNU2-38P-201ENST00000410856 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
RNU2-38P-201ENST00000410856 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
RNU2-38P-201ENST00000410856 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
RNU2-38P-201ENST00000410856 PRKAR2AP13861 404 aaKnown RBP10.14□□□□□ -0.79
RNU2-38P-201ENST00000410856 ZNF692Q9BU19 519 aaPredicted RBP10.13□□□□□ -0.79
RNU2-38P-201ENST00000410856 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
RNU2-38P-201ENST00000410856 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
RNU2-38P-201ENST00000410856 EVX2Q03828 476 aa10.08□□□□□ -0.8
RNU2-38P-201ENST00000410856 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
RNU2-38P-201ENST00000410856 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
RNU2-38P-201ENST00000410856 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU2-38P-201ENST00000410856 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
RNU2-38P-201ENST00000410856 GABBR2O75899 941 aa9.92□□□□□ -0.82
RNU2-38P-201ENST00000410856 CD44P16070 742 aaKnown RBP9.82□□□□□ -0.84
RNU2-38P-201ENST00000410856 CLCN6P51797 869 aa9.81□□□□□ -0.84
RNU2-38P-201ENST00000410856 LHX8Q68G74 356 aa9.81□□□□□ -0.84
RNU2-38P-201ENST00000410856 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
RNU2-38P-201ENST00000410856 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
RNU2-38P-201ENST00000410856 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
RNU2-38P-201ENST00000410856 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
RNU2-38P-201ENST00000410856 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
RNU2-38P-201ENST00000410856 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
RNU2-38P-201ENST00000410856 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
RNU2-38P-201ENST00000410856 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
RNU2-38P-201ENST00000410856 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
RNU2-38P-201ENST00000410856 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
RNU2-38P-201ENST00000410856 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNU2-38P-201ENST00000410856 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
RNU2-38P-201ENST00000410856 EHMT2Q96KQ7 1210 aa9.5□□□□□ -0.89
RNU2-38P-201ENST00000410856 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
RNU2-38P-201ENST00000410856 MNX1P50219 401 aaPredicted RBP9.42□□□□□ -0.9
RNU2-38P-201ENST00000410856 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
RNU2-38P-201ENST00000410856 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
RNU2-38P-201ENST00000410856 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
RNU2-38P-201ENST00000410856 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
RNU2-38P-201ENST00000410856 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
RNU2-38P-201ENST00000410856 SLC39A7Q92504 469 aa9.33□□□□□ -0.92
RNU2-38P-201ENST00000410856 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
RNU2-38P-201ENST00000410856 C7P10643 843 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms