Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 BX664615.1-201ENST00000443558 458 ntBASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNAP47Q5SQN1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SNAP47Q5SQN1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 TSPY17P-201ENST00000450329 467 ntBASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 CKBP1-201ENST00000565489 1086 ntBASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 AC139887.4-201ENST00000607877 719 ntBASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAP47Q5SQN1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 AC092338.2-201ENST00000568827 1415 ntBASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNAP47Q5SQN1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 AC117947.1-201ENST00000427448 529 ntBASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 AL353719.1-201ENST00000566847 864 ntBASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 AL023803.3-201ENST00000615559 522 ntBASIC18.43■□□□□ 0.54
SNAP47Q5SQN1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms