Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SFTPBP07988 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SFTPBP07988 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.5■□□□□ 0.23
SFTPBP07988 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.5■□□□□ 0.23
SFTPBP07988 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.5■□□□□ 0.23
SFTPBP07988 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 AC142381.4-202ENST00000563973 229 ntBASIC16.5■□□□□ 0.23
SFTPBP07988 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 ZNF815P-204ENST00000434898 1737 ntBASIC16.5■□□□□ 0.23
SFTPBP07988 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SFTPBP07988 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.5■□□□□ 0.23
SFTPBP07988 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
SFTPBP07988 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.49■□□□□ 0.23
SFTPBP07988 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
SFTPBP07988 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 POM121L13P-201ENST00000422362 380 ntBASIC16.49■□□□□ 0.23
SFTPBP07988 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.49■□□□□ 0.23
SFTPBP07988 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.49■□□□□ 0.23
SFTPBP07988 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.49■□□□□ 0.23
SFTPBP07988 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.49■□□□□ 0.23
SFTPBP07988 AC069544.1-201ENST00000609399 999 ntBASIC16.49■□□□□ 0.23
SFTPBP07988 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SFTPBP07988 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.49■□□□□ 0.23
SFTPBP07988 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SFTPBP07988 TEX21P-204ENST00000641479 1693 ntBASIC16.49■□□□□ 0.23
SFTPBP07988 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
SFTPBP07988 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 AC007613.1-201ENST00000572811 2597 ntBASIC16.48■□□□□ 0.23
SFTPBP07988 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.48■□□□□ 0.23
SFTPBP07988 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.48■□□□□ 0.23
SFTPBP07988 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SFTPBP07988 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SFTPBP07988 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.48■□□□□ 0.23
SFTPBP07988 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.48■□□□□ 0.23
SFTPBP07988 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SFTPBP07988 AL121906.2-201ENST00000621597 723 ntBASIC16.48■□□□□ 0.23
SFTPBP07988 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 AP006587.1-201ENST00000534129 1502 ntBASIC16.48■□□□□ 0.23
SFTPBP07988 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SFTPBP07988 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SFTPBP07988 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 AL161938.1-201ENST00000569833 2180 ntBASIC16.47■□□□□ 0.23
SFTPBP07988 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SFTPBP07988 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.47■□□□□ 0.23
SFTPBP07988 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SFTPBP07988 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SFTPBP07988 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.47■□□□□ 0.23
SFTPBP07988 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms