Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 LSM12P1-201ENST00000411836 588 ntBASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AC007322.1-201ENST00000426983 750 ntBASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 YBX1P10-201ENST00000444752 975 ntBASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AC005829.2-201ENST00000571422 1056 ntBASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AL162741.1-201ENST00000565563 1558 ntBASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 MKRN4P-201ENST00000444706 1521 ntBASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 AC016769.1-201ENST00000409132 1010 ntBASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 AC093787.1-201ENST00000450396 207 ntBASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM56-RWDD3S4R434 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMEM56-RWDD3S4R434 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 AP006587.1-201ENST00000534129 1502 ntBASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM56-RWDD3S4R434 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 AC006015.1-201ENST00000429970 570 ntBASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM56-RWDD3S4R434 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms