Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPB1P53618 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.9■□□□□ 0.94
COPB1P53618 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.9■□□□□ 0.94
COPB1P53618 AL109923.1-201ENST00000618799 583 ntBASIC20.9■□□□□ 0.94
COPB1P53618 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.9■□□□□ 0.94
COPB1P53618 AC133041.1-202ENST00000642053 222 ntBASIC20.9■□□□□ 0.94
COPB1P53618 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COPB1P53618 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPB1P53618 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPB1P53618 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPB1P53618 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPB1P53618 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
COPB1P53618 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COPB1P53618 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.89■□□□□ 0.94
COPB1P53618 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
COPB1P53618 AIRN-201ENST00000601203 4374 ntBASIC20.89■□□□□ 0.94
COPB1P53618 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.89■□□□□ 0.93
COPB1P53618 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.89■□□□□ 0.93
COPB1P53618 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COPB1P53618 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COPB1P53618 UNC93B4-201ENST00000505679 747 ntBASIC20.89■□□□□ 0.93
COPB1P53618 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.89■□□□□ 0.93
COPB1P53618 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.89■□□□□ 0.93
COPB1P53618 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COPB1P53618 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.89■□□□□ 0.93
COPB1P53618 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COPB1P53618 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.89■□□□□ 0.93
COPB1P53618 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPB1P53618 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COPB1P53618 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COPB1P53618 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COPB1P53618 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COPB1P53618 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 AL390961.4-201ENST00000623958 2535 ntBASIC20.88■□□□□ 0.93
COPB1P53618 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB1P53618 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.88■□□□□ 0.93
COPB1P53618 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB1P53618 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.88■□□□□ 0.93
COPB1P53618 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.87■□□□□ 0.93
COPB1P53618 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COPB1P53618 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
COPB1P53618 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.87■□□□□ 0.93
COPB1P53618 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 HLA-A-209ENST00000638375 975 ntBASIC20.87■□□□□ 0.93
COPB1P53618 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB1P53618 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.87■□□□□ 0.93
COPB1P53618 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COPB1P53618 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB1P53618 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COPB1P53618 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.86■□□□□ 0.93
COPB1P53618 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.86■□□□□ 0.93
COPB1P53618 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.86■□□□□ 0.93
COPB1P53618 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB1P53618 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB1P53618 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB1P53618 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.86■□□□□ 0.93
COPB1P53618 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.86■□□□□ 0.93
COPB1P53618 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB1P53618 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.86■□□□□ 0.93
COPB1P53618 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COPB1P53618 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COPB1P53618 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
COPB1P53618 POM121L13P-201ENST00000422362 380 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms