Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 HMGB1P14-201ENST00000557424 591 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 RN7SL356P-201ENST00000582228 248 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 AC008121.1-201ENST00000603244 268 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.772-201ENST00000606692 102 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 U2.14-201ENST00000615943 113 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 OR4G2P-202ENST00000641004 1759 ntBASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB9Q9Y5E1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 MIR133A2-201ENST00000347538 102 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 SNORA70.6-201ENST00000383934 134 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 HSPA8P15-201ENST00000401676 786 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 RNA5SP487-201ENST00000410186 122 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AC091390.3-201ENST00000426478 338 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AL627311.1-201ENST00000431514 115 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 PSMD10P3-201ENST00000437000 448 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AL589765.3-201ENST00000446084 462 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 RNU7-120P-201ENST00000459334 63 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 EDDM3DP-201ENST00000554692 434 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 RPL10P14-201ENST00000565265 298 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 MIR4643-201ENST00000577473 78 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AC005046.1-201ENST00000608515 625 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 AC244107.2-201ENST00000611773 76 ntBASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB9Q9Y5E1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 RNU1-106P-201ENST00000384382 164 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 U3.36-201ENST00000408418 213 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 TOMM20P4-201ENST00000427861 435 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AL358472.1-201ENST00000431295 329 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AL591043.1-201ENST00000432461 424 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AC009963.2-201ENST00000453431 138 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 RNU7-87P-201ENST00000459343 62 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AC104164.2-201ENST00000496953 495 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 Y_RNA.706-201ENST00000516933 99 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 SCARNA24.2-201ENST00000516968 130 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 RPL23AP78-201ENST00000599928 470 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 AC108738.1-201ENST00000603703 237 ntBASIC5.4□□□□□ -1.54
PCDHB9Q9Y5E1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.4□□□□□ -1.55
PCDHB9Q9Y5E1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 RNU6-227P-201ENST00000362865 103 ntBASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 RN7SKP145-201ENST00000363291 303 ntBASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 RNU6-125P-201ENST00000384505 107 ntBASIC5.39□□□□□ -1.55
PCDHB9Q9Y5E1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms