Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
POLR2J3Q9H1A7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
POLR2J3Q9H1A7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.34■■□□□ 1.33
POLR2J3Q9H1A7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
POLR2J3Q9H1A7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
POLR2J3Q9H1A7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 AC135983.2-203ENST00000454486 1613 ntBASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 MIR3665-201ENST00000578708 105 ntBASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 LINC00273-201ENST00000539813 1452 ntBASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 DUX4L28-201ENST00000623687 678 ntBASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 AP006261.1-201ENST00000584783 668 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 MIR6090-201ENST00000622481 60 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 AC018358.1-201ENST00000631079 1402 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.21■■□□□ 1.31
POLR2J3Q9H1A7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.21■■□□□ 1.31
POLR2J3Q9H1A7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2J3Q9H1A7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2J3Q9H1A7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms