Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SIMC1Q8NDZ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.85■■□□□ 1.41
SIMC1Q8NDZ2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIMC1Q8NDZ2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIMC1Q8NDZ2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIMC1Q8NDZ2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.84■■□□□ 1.41
SIMC1Q8NDZ2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.84■■□□□ 1.41
SIMC1Q8NDZ2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.84■■□□□ 1.41
SIMC1Q8NDZ2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIMC1Q8NDZ2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SIMC1Q8NDZ2 ABHD17AP4-201ENST00000411545 909 ntBASIC23.83■■□□□ 1.41
SIMC1Q8NDZ2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SIMC1Q8NDZ2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SIMC1Q8NDZ2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SIMC1Q8NDZ2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIMC1Q8NDZ2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIMC1Q8NDZ2 ZNRF2P2-203ENST00000454624 420 ntBASIC23.82■■□□□ 1.4
SIMC1Q8NDZ2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIMC1Q8NDZ2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SIMC1Q8NDZ2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SIMC1Q8NDZ2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.81■■□□□ 1.4
SIMC1Q8NDZ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.81■■□□□ 1.4
SIMC1Q8NDZ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.81■■□□□ 1.4
SIMC1Q8NDZ2 AC142086.6-201ENST00000621154 1765 ntBASIC23.8■■□□□ 1.4
SIMC1Q8NDZ2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIMC1Q8NDZ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIMC1Q8NDZ2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIMC1Q8NDZ2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SIMC1Q8NDZ2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.79■■□□□ 1.4
SIMC1Q8NDZ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SIMC1Q8NDZ2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.79■■□□□ 1.4
SIMC1Q8NDZ2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIMC1Q8NDZ2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIMC1Q8NDZ2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.77■■□□□ 1.4
SIMC1Q8NDZ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SIMC1Q8NDZ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SIMC1Q8NDZ2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SIMC1Q8NDZ2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SIMC1Q8NDZ2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SIMC1Q8NDZ2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.75■■□□□ 1.39
SIMC1Q8NDZ2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.75■■□□□ 1.39
SIMC1Q8NDZ2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIMC1Q8NDZ2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIMC1Q8NDZ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SIMC1Q8NDZ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SIMC1Q8NDZ2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SIMC1Q8NDZ2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SIMC1Q8NDZ2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SIMC1Q8NDZ2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.73■■□□□ 1.39
SIMC1Q8NDZ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SIMC1Q8NDZ2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SIMC1Q8NDZ2 LINC01971-201ENST00000617888 1048 ntBASIC23.72■■□□□ 1.39
SIMC1Q8NDZ2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.72■■□□□ 1.39
SIMC1Q8NDZ2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SIMC1Q8NDZ2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SIMC1Q8NDZ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 AP002414.2-202ENST00000590929 1450 ntBASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SIMC1Q8NDZ2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 DUX4L11-201ENST00000611504 1267 ntBASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 DUX4L12-201ENST00000614593 1267 ntBASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 DUX4L14-201ENST00000621227 1267 ntBASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 AC110285.7-201ENST00000624417 1536 ntBASIC23.69■■□□□ 1.38
SIMC1Q8NDZ2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.68■■□□□ 1.38
SIMC1Q8NDZ2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SIMC1Q8NDZ2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SIMC1Q8NDZ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.67■■□□□ 1.38
SIMC1Q8NDZ2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.67■■□□□ 1.38
SIMC1Q8NDZ2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
SIMC1Q8NDZ2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SIMC1Q8NDZ2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.66■■□□□ 1.38
SIMC1Q8NDZ2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIMC1Q8NDZ2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
SIMC1Q8NDZ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIMC1Q8NDZ2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SIMC1Q8NDZ2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIMC1Q8NDZ2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SIMC1Q8NDZ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L13-201ENST00000554103 1267 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L15-201ENST00000611059 1267 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L23-201ENST00000615195 1269 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L24-201ENST00000617576 1269 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L22-201ENST00000618238 1269 ntBASIC23.63■■□□□ 1.37
SIMC1Q8NDZ2 DUX4L20-201ENST00000619712 1269 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms