Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 MEP1YGR121C 1479 nt8.15□□□□□ -1.1
VPS3P23643 ORT1YOR130C 879 nt8.15□□□□□ -1.1
VPS3P23643 LRO1YNR008W 1986 nt8.14□□□□□ -1.11
VPS3P23643 RRT6YGL146C 936 nt8.14□□□□□ -1.11
VPS3P23643 CPT1YNL130C 1182 nt8.14□□□□□ -1.11
VPS3P23643 PUS7YOR243C 2031 nt8.13□□□□□ -1.11
VPS3P23643 HXT8YJL214W 1710 nt8.13□□□□□ -1.11
VPS3P23643 HAC1YFL031W 717 nt8.13□□□□□ -1.11
VPS3P23643 TRP2YER090W 1524 nt8.12□□□□□ -1.11
VPS3P23643 SPR1YOR190W 1338 nt8.11□□□□□ -1.11
VPS3P23643 YGR137WYGR137W 375 nt8.1□□□□□ -1.11
VPS3P23643 YLR358CYLR358C 564 nt8.1□□□□□ -1.11
VPS3P23643 snR4snR4 186 nt8.1□□□□□ -1.11
VPS3P23643 DUS3YLR401C 2007 nt8.09□□□□□ -1.11
VPS3P23643 PNS1YOR161C 1620 nt8.09□□□□□ -1.11
VPS3P23643 YPL247CYPL247C 1572 nt8.08□□□□□ -1.12
VPS3P23643 HXT11YOL156W 1704 nt8.08□□□□□ -1.12
VPS3P23643 ARG7YMR062C 1326 nt8.07□□□□□ -1.12
VPS3P23643 MAM3YOL060C 2121 nt8.07□□□□□ -1.12
VPS3P23643 WSC3YOL105C 1671 nt8.07□□□□□ -1.12
VPS3P23643 NDE2YDL085W 1638 nt8.07□□□□□ -1.12
VPS3P23643 ADE16YLR028C 1776 nt8.06□□□□□ -1.12
VPS3P23643 BUD31YCR063W 474 nt8.05□□□□□ -1.12
VPS3P23643 APT1YML022W 564 nt8.05□□□□□ -1.12
VPS3P23643 TDA4YJR116W 840 nt8.04□□□□□ -1.12
VPS3P23643 RPR1RPR1 369 nt8.04□□□□□ -1.12
VPS3P23643 YRF1-1YDR545W 5391 nt8.03□□□□□ -1.12
VPS3P23643 YRF1-5YLR467W 5391 nt8.03□□□□□ -1.12
VPS3P23643 YRF1-8YOR396W 5391 nt8.03□□□□□ -1.12
VPS3P23643 YLR072WYLR072W 2082 nt8.02□□□□□ -1.12
VPS3P23643 DIP5YPL265W 1827 nt8.02□□□□□ -1.13
VPS3P23643 HIS3YOR202W 663 nt8.02□□□□□ -1.13
VPS3P23643 INO1YJL153C 1602 nt8.02□□□□□ -1.13
VPS3P23643 SRM1YGL097W 1449 nt8.01□□□□□ -1.13
VPS3P23643 ECM10YEL030W 1935 nt8□□□□□ -1.13
VPS3P23643 MET30YIL046W 1923 nt8□□□□□ -1.13
VPS3P23643 YML079WYML079W 606 nt8□□□□□ -1.13
VPS3P23643 PUP2YGR253C 783 nt7.98□□□□□ -1.13
VPS3P23643 TGL5YOR081C 2250 nt7.98□□□□□ -1.13
VPS3P23643 YNL190WYNL190W 615 nt7.97□□□□□ -1.13
VPS3P23643 ADE5,7YGL234W 2409 nt7.97□□□□□ -1.13
VPS3P23643 GLY1YEL046C 1164 nt7.96□□□□□ -1.14
VPS3P23643 PIH1YHR034C 1035 nt7.96□□□□□ -1.14
VPS3P23643 MNN9YPL050C 1188 nt7.96□□□□□ -1.14
VPS3P23643 LEA1YPL213W 717 nt7.96□□□□□ -1.14
VPS3P23643 CRN1YLR429W 1956 nt7.95□□□□□ -1.14
VPS3P23643 CPR2YHR057C 618 nt7.95□□□□□ -1.14
VPS3P23643 COS10YNR075W 1125 nt7.95□□□□□ -1.14
VPS3P23643 DIA4YHR011W 1341 nt7.95□□□□□ -1.14
VPS3P23643 PFS2YNL317W 1398 nt7.95□□□□□ -1.14
VPS3P23643 FTH1YBR207W 1398 nt7.95□□□□□ -1.14
VPS3P23643 INM1YHR046C 888 nt7.94□□□□□ -1.14
VPS3P23643 ARO3YDR035W 1113 nt7.93□□□□□ -1.14
VPS3P23643 NCA3YJL116C 1014 nt7.93□□□□□ -1.14
VPS3P23643 MRP7YNL005C 1116 nt7.93□□□□□ -1.14
VPS3P23643 ERV2YPR037C 591 nt7.93□□□□□ -1.14
VPS3P23643 TIF3YPR163C 1311 nt7.93□□□□□ -1.14
VPS3P23643 ALG7YBR243C 1347 nt7.93□□□□□ -1.14
VPS3P23643 ABP1YCR088W 1779 nt7.92□□□□□ -1.14
VPS3P23643 SNP1YIL061C 903 nt7.92□□□□□ -1.14
VPS3P23643 STS1YIR011C 960 nt7.92□□□□□ -1.14
VPS3P23643 YNL140CYNL140C 570 nt7.92□□□□□ -1.14
VPS3P23643 ATP23YNR020C 813 nt7.92□□□□□ -1.14
VPS3P23643 SLM3YDL033C 1254 nt7.91□□□□□ -1.14
VPS3P23643 TES1YJR019C 1050 nt7.91□□□□□ -1.14
VPS3P23643 HSV2YGR223C 1347 nt7.91□□□□□ -1.14
VPS3P23643 MAS2YHR024C 1449 nt7.91□□□□□ -1.14
VPS3P23643 LAT1YNL071W 1449 nt7.91□□□□□ -1.14
VPS3P23643 MSI1YBR195C 1269 nt7.9□□□□□ -1.14
VPS3P23643 YEL023CYEL023C 2049 nt7.9□□□□□ -1.15
VPS3P23643 LAS17YOR181W 1902 nt7.9□□□□□ -1.15
VPS3P23643 WSC4YHL028W 1818 nt7.89□□□□□ -1.15
VPS3P23643 STE3YKL178C 1413 nt7.89□□□□□ -1.15
VPS3P23643 RRP43YCR035C 1185 nt7.89□□□□□ -1.15
VPS3P23643 YAL019W-AYAL019W-A 570 nt7.89□□□□□ -1.15
VPS3P23643 YJR142WYJR142W 1029 nt7.89□□□□□ -1.15
VPS3P23643 YBL111CYBL111C 2004 nt7.88□□□□□ -1.15
VPS3P23643 DOC1YGL240W 753 nt7.88□□□□□ -1.15
VPS3P23643 MDH2YOL126C 1134 nt7.88□□□□□ -1.15
VPS3P23643 NMA2YGR010W 1188 nt7.87□□□□□ -1.15
VPS3P23643 YGL081WYGL081W 963 nt7.86□□□□□ -1.15
VPS3P23643 URA1YKL216W 945 nt7.86□□□□□ -1.15
VPS3P23643 INP54YOL065C 1155 nt7.86□□□□□ -1.15
VPS3P23643 MRN1YPL184C 1839 nt7.86□□□□□ -1.15
VPS3P23643 YNL295WYNL295W 1575 nt7.85□□□□□ -1.15
VPS3P23643 AIM34YMR003W 597 nt7.85□□□□□ -1.15
VPS3P23643 PTH2YBL057C 627 nt7.85□□□□□ -1.15
VPS3P23643 YJL045WYJL045W 1905 nt7.85□□□□□ -1.15
VPS3P23643 PSA1YDL055C 1086 nt7.84□□□□□ -1.15
VPS3P23643 DST1YGL043W 930 nt7.84□□□□□ -1.15
VPS3P23643 YOX1YML027W 1158 nt7.84□□□□□ -1.15
VPS3P23643 HRB1YNL004W 1365 nt7.84□□□□□ -1.16
VPS3P23643 STF1YDL130W-A 261 nt7.82□□□□□ -1.16
VPS3P23643 CKI1YLR133W 1749 nt7.82□□□□□ -1.16
VPS3P23643 KTR4YBR199W 1395 nt7.82□□□□□ -1.16
VPS3P23643 OSM1YJR051W 1506 nt7.81□□□□□ -1.16
VPS3P23643 CDC3YLR314C 1563 nt7.8□□□□□ -1.16
VPS3P23643 YML034C-AYML034C-A 399 nt7.8□□□□□ -1.16
VPS3P23643 FRT1YOR324C 1809 nt7.8□□□□□ -1.16
VPS3P23643 AOS1YPR180W 1044 nt7.79□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 125.5 ms