Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MIR6090-201ENST00000622481 60 ntBASIC22.79■■□□□ 1.24
HIST1H1CP16403 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
HIST1H1CP16403 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HIST1H1CP16403 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.79■■□□□ 1.24
HIST1H1CP16403 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
HIST1H1CP16403 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HIST1H1CP16403 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HIST1H1CP16403 DUX4L28-201ENST00000623687 678 ntBASIC22.78■■□□□ 1.24
HIST1H1CP16403 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.77■■□□□ 1.24
HIST1H1CP16403 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HIST1H1CP16403 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.76■■□□□ 1.23
HIST1H1CP16403 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HIST1H1CP16403 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.76■■□□□ 1.23
HIST1H1CP16403 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HIST1H1CP16403 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HIST1H1CP16403 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
HIST1H1CP16403 WHAMMP2-203ENST00000563942 1603 ntBASIC22.75■■□□□ 1.23
HIST1H1CP16403 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HIST1H1CP16403 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.74■■□□□ 1.23
HIST1H1CP16403 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HIST1H1CP16403 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.74■■□□□ 1.23
HIST1H1CP16403 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.74■■□□□ 1.23
HIST1H1CP16403 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HIST1H1CP16403 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HIST1H1CP16403 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HIST1H1CP16403 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
HIST1H1CP16403 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
HIST1H1CP16403 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HIST1H1CP16403 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HIST1H1CP16403 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HIST1H1CP16403 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HIST1H1CP16403 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
HIST1H1CP16403 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HIST1H1CP16403 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 LINC00273-201ENST00000539813 1452 ntBASIC22.69■■□□□ 1.22
HIST1H1CP16403 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.69■■□□□ 1.22
HIST1H1CP16403 MIR3665-201ENST00000578708 105 ntBASIC22.69■■□□□ 1.22
HIST1H1CP16403 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.69■■□□□ 1.22
HIST1H1CP16403 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HIST1H1CP16403 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
HIST1H1CP16403 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HIST1H1CP16403 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
HIST1H1CP16403 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.67■■□□□ 1.22
HIST1H1CP16403 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.67■■□□□ 1.22
HIST1H1CP16403 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HIST1H1CP16403 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.67■■□□□ 1.22
HIST1H1CP16403 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HIST1H1CP16403 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
HIST1H1CP16403 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.66■■□□□ 1.22
HIST1H1CP16403 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.66■■□□□ 1.22
HIST1H1CP16403 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.66■■□□□ 1.22
HIST1H1CP16403 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HIST1H1CP16403 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HIST1H1CP16403 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HIST1H1CP16403 AC018358.1-201ENST00000631079 1402 ntBASIC22.65■■□□□ 1.22
HIST1H1CP16403 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HIST1H1CP16403 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
HIST1H1CP16403 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HIST1H1CP16403 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
HIST1H1CP16403 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HIST1H1CP16403 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HIST1H1CP16403 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.63■■□□□ 1.21
HIST1H1CP16403 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
HIST1H1CP16403 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
HIST1H1CP16403 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.62■■□□□ 1.21
HIST1H1CP16403 AP006261.1-201ENST00000584783 668 ntBASIC22.62■■□□□ 1.21
HIST1H1CP16403 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HIST1H1CP16403 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HIST1H1CP16403 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HIST1H1CP16403 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HIST1H1CP16403 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HIST1H1CP16403 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HIST1H1CP16403 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HIST1H1CP16403 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HIST1H1CP16403 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HIST1H1CP16403 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HIST1H1CP16403 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HIST1H1CP16403 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HIST1H1CP16403 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.59■■□□□ 1.21
HIST1H1CP16403 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.59■■□□□ 1.21
HIST1H1CP16403 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HIST1H1CP16403 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HIST1H1CP16403 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
HIST1H1CP16403 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HIST1H1CP16403 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
HIST1H1CP16403 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
HIST1H1CP16403 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HIST1H1CP16403 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.57■■□□□ 1.2
HIST1H1CP16403 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIST1H1CP16403 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms