Protein–RNA interactions for Protein: O75152

ZC3H11A, Zinc finger CCCH domain-containing protein 11A, humanhuman

Known RBP eCLIP

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11AO75152 ZDHHC19-204ENST00000460442 572 ntTSL 217.42■□□□□ 0.387e-6■■■■■ 33.7
ZC3H11AO75152 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.39■□□□□ 0.377e-6■■■■■ 33.7
ZC3H11AO75152 TGM2-206ENST00000474777 2287 ntTSL 1 (best)17.38■□□□□ 0.377e-6■■■■■ 33.7
ZC3H11AO75152 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.367e-6■■■■■ 33.7
ZC3H11AO75152 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.357e-6■■■■■ 33.7
ZC3H11AO75152 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.337e-6■■■■■ 33.7
ZC3H11AO75152 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.327e-6■■■■■ 33.7
ZC3H11AO75152 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.98■□□□□ 0.317e-6■■■■■ 33.7
ZC3H11AO75152 RPLP2-208ENST00000532004 353 ntTSL 316.93■□□□□ 0.33e-7■■■■■ 33.7
ZC3H11AO75152 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.92■□□□□ 0.37e-6■■■■■ 33.7
ZC3H11AO75152 SPATA20-228ENST00000635113 1706 ntTSL 1 (best)16.88■□□□□ 0.297e-6■■■■■ 33.7
ZC3H11AO75152 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.297e-6■■■■■ 33.7
ZC3H11AO75152 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.267e-6■■■■■ 33.7
ZC3H11AO75152 ARRB2-213ENST00000573886 665 ntTSL 216.64■□□□□ 0.257e-6■■■■■ 33.7
ZC3H11AO75152 MRPL20-204ENST00000487659 1693 ntTSL 216.62■□□□□ 0.257e-6■■■■■ 33.7
ZC3H11AO75152 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.62■□□□□ 0.257e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-209ENST00000448962 2384 ntTSL 216.52■□□□□ 0.237e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.52■□□□□ 0.237e-6■■■■■ 33.7
ZC3H11AO75152 MXD4-205ENST00000515378 522 ntTSL 216.48■□□□□ 0.237e-6■■■■■ 33.7
ZC3H11AO75152 VPS28-215ENST00000531924 695 ntTSL 316.48■□□□□ 0.237e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-204ENST00000466498 371 ntTSL 216.4■□□□□ 0.227e-6■■■■■ 33.7
ZC3H11AO75152 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.4■□□□□ 0.227e-6■■■■■ 33.7
ZC3H11AO75152 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.38■□□□□ 0.217e-6■■■■■ 33.7
ZC3H11AO75152 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.36■□□□□ 0.217e-6■■■■■ 33.7
ZC3H11AO75152 ZDHHC19-205ENST00000465519 1813 ntTSL 1 (best)16.36■□□□□ 0.217e-6■■■■■ 33.7
ZC3H11AO75152 USP28-204ENST00000537642 732 ntTSL 316.36■□□□□ 0.217e-6■■■■■ 33.7
ZC3H11AO75152 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.217e-6■■■■■ 33.7
ZC3H11AO75152 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.27e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.197e-6■■■■■ 33.7
ZC3H11AO75152 MON1A-205ENST00000483022 875 ntTSL 316.24■□□□□ 0.197e-6■■■■■ 33.7
ZC3H11AO75152 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.22■□□□□ 0.197e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-210ENST00000488338 533 ntTSL 316.07■□□□□ 0.167e-6■■■■■ 33.7
ZC3H11AO75152 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.167e-6■■■■■ 33.7
ZC3H11AO75152 MON1A-206ENST00000484985 785 ntTSL 216.05■□□□□ 0.167e-6■■■■■ 33.7
ZC3H11AO75152 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 PIN1-204ENST00000586025 4022 ntTSL 216■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.96■□□□□ 0.157e-6■■■■■ 33.7
ZC3H11AO75152 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.147e-6■■■■■ 33.7
ZC3H11AO75152 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.147e-6■■■■■ 33.7
ZC3H11AO75152 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.133e-7■■■■■ 33.7
ZC3H11AO75152 USP36-207ENST00000587010 607 ntTSL 315.88■□□□□ 0.137e-6■■■■■ 33.7
ZC3H11AO75152 TGM2-204ENST00000468262 1862 ntTSL 1 (best)15.84■□□□□ 0.137e-6■■■■■ 33.7
ZC3H11AO75152 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.81■□□□□ 0.127e-6■■■■■ 33.7
ZC3H11AO75152 HOXC9-202ENST00000504557 581 ntTSL 315.8■□□□□ 0.127e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-206ENST00000436445 752 ntTSL 215.77■□□□□ 0.127e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-208ENST00000445961 944 ntTSL 515.77■□□□□ 0.127e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.127e-6■■■■■ 33.7
ZC3H11AO75152 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.71■□□□□ 0.117e-6■■■■■ 33.7
ZC3H11AO75152 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.17e-6■■■■■ 33.7
ZC3H11AO75152 USP28-209ENST00000540925 561 ntTSL 415.66■□□□□ 0.17e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.097e-6■■■■■ 33.7
ZC3H11AO75152 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.63■□□□□ 0.097e-6■■■■■ 33.7
ZC3H11AO75152 SCAP-207ENST00000441517 3748 ntTSL 215.63■□□□□ 0.097e-6■■■■■ 33.7
ZC3H11AO75152 RGS14-207ENST00000506944 590 ntTSL 215.61■□□□□ 0.097e-6■■■■■ 33.7
ZC3H11AO75152 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.087e-6■■■■■ 33.7
ZC3H11AO75152 SCAP-202ENST00000320017 3430 ntTSL 215.52■□□□□ 0.077e-6■■■■■ 33.7
ZC3H11AO75152 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.41■□□□□ 0.067e-6■■■■■ 33.7
ZC3H11AO75152 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.057e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-208ENST00000474831 564 ntTSL 315.26■□□□□ 0.037e-6■■■■■ 33.7
ZC3H11AO75152 USP36-221ENST00000592231 2479 ntTSL 215.21■□□□□ 0.037e-6■■■■■ 33.7
ZC3H11AO75152 HOXC6-203ENST00000504315 538 ntTSL 315.14■□□□□ 0.017e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-211ENST00000484121 897 ntTSL 215.12■□□□□ 0.017e-6■■■■■ 33.7
ZC3H11AO75152 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.017e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.1■□□□□ 0.017e-6■■■■■ 33.7
ZC3H11AO75152 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 07e-6■■■■■ 33.7
ZC3H11AO75152 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 07e-6■■■■■ 33.7
ZC3H11AO75152 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.017e-6■■■■■ 33.7
ZC3H11AO75152 USP36-214ENST00000589225 5885 ntTSL 1 (best)14.96□□□□□ -0.017e-6■■■■■ 33.7
ZC3H11AO75152 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.057e-6■■■■■ 33.7
ZC3H11AO75152 ELP5-207ENST00000571146 890 ntTSL 314.76□□□□□ -0.057e-6■■■■■ 33.7
ZC3H11AO75152 TGM2-203ENST00000453095 693 ntTSL 414.74□□□□□ -0.057e-6■■■■■ 33.7
ZC3H11AO75152 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.66□□□□□ -0.067e-6■■■■■ 33.7
ZC3H11AO75152 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.66□□□□□ -0.067e-6■■■■■ 33.7
ZC3H11AO75152 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.067e-6■■■■■ 33.7
ZC3H11AO75152 XYLT2-206ENST00000571021 2174 nt14.63□□□□□ -0.077e-6■■■■■ 33.7
ZC3H11AO75152 RPL35-204ENST00000493018 692 ntTSL 314.59□□□□□ -0.077e-6■■■■■ 33.7
ZC3H11AO75152 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.56□□□□□ -0.087e-6■■■■■ 33.7
ZC3H11AO75152 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.53□□□□□ -0.087e-6■■■■■ 33.7
ZC3H11AO75152 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)14.52□□□□□ -0.097e-6■■■■■ 33.7
ZC3H11AO75152 PIN1-209ENST00000590540 702 ntTSL 314.51□□□□□ -0.097e-6■■■■■ 33.7
ZC3H11AO75152 USP28-212ENST00000544750 542 ntTSL 514.5□□□□□ -0.097e-6■■■■■ 33.7
ZC3H11AO75152 ADGRD1-204ENST00000446583 5529 ntTSL 514.4□□□□□ -0.17e-6■■■■■ 33.7
ZC3H11AO75152 ZW10-202ENST00000535142 2735 ntTSL 214.39□□□□□ -0.117e-6■■■■■ 33.7
ZC3H11AO75152 RELT-207ENST00000545886 4346 ntTSL 214.37□□□□□ -0.117e-6■■■■■ 33.7
ZC3H11AO75152 SRP19-206ENST00000515463 660 ntTSL 3 BASIC14.37□□□□□ -0.117e-6■■■■■ 33.7
ZC3H11AO75152 MAEA-205ENST00000503653 845 ntTSL 314.36□□□□□ -0.117e-6■■■■■ 33.7
ZC3H11AO75152 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.117e-6■■■■■ 33.7
ZC3H11AO75152 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.28□□□□□ -0.127e-6■■■■■ 33.7
ZC3H11AO75152 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.137e-6■■■■■ 33.7
ZC3H11AO75152 VPS28-216ENST00000533806 650 ntTSL 314.24□□□□□ -0.137e-6■■■■■ 33.7
ZC3H11AO75152 SUMO3-206ENST00000479153 1736 ntTSL 214.2□□□□□ -0.147e-6■■■■■ 33.7
ZC3H11AO75152 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.147e-6■■■■■ 33.7
ZC3H11AO75152 SMYD3-207ENST00000462422 971 ntTSL 514.14□□□□□ -0.157e-6■■■■■ 33.7
ZC3H11AO75152 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.157e-6■■■■■ 33.7
ZC3H11AO75152 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.09□□□□□ -0.151e-8■■■■■ 33.7
ZC3H11AO75152 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC14.08□□□□□ -0.167e-6■■■■■ 33.7
ZC3H11AO75152 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.167e-6■■■■■ 33.7
Retrieved 100 of 9,514 protein–RNA pairs in 287.5 ms