RNA–Protein interactions for RNA: ENST00000454808.2

PGAM5-202, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 3 BASIC

Gene PGAM5, Length 1,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-202ENST00000454808 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
PGAM5-202ENST00000454808 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
PGAM5-202ENST00000454808 ABCC9O60706 1549 aa27.05■■□□□ 1.92
PGAM5-202ENST00000454808 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
PGAM5-202ENST00000454808 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
PGAM5-202ENST00000454808 NACADO15069 1562 aa26.01■■□□□ 1.75
PGAM5-202ENST00000454808 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
PGAM5-202ENST00000454808 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
PGAM5-202ENST00000454808 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
PGAM5-202ENST00000454808 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
PGAM5-202ENST00000454808 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
PGAM5-202ENST00000454808 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
PGAM5-202ENST00000454808 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
PGAM5-202ENST00000454808 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
PGAM5-202ENST00000454808 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
PGAM5-202ENST00000454808 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
PGAM5-202ENST00000454808 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
PGAM5-202ENST00000454808 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
PGAM5-202ENST00000454808 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
PGAM5-202ENST00000454808 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
PGAM5-202ENST00000454808 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
PGAM5-202ENST00000454808 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
PGAM5-202ENST00000454808 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
PGAM5-202ENST00000454808 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
PGAM5-202ENST00000454808 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
PGAM5-202ENST00000454808 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
PGAM5-202ENST00000454808 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
PGAM5-202ENST00000454808 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
PGAM5-202ENST00000454808 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
PGAM5-202ENST00000454808 WIZO95785 1651 aa23.73■■□□□ 1.39
PGAM5-202ENST00000454808 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
PGAM5-202ENST00000454808 TOP2AP11388 1531 aaKnown RBP23.48■■□□□ 1.35
PGAM5-202ENST00000454808 NESP48681 1621 aa23.41■■□□□ 1.34
PGAM5-202ENST00000454808 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
PGAM5-202ENST00000454808 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
PGAM5-202ENST00000454808 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
PGAM5-202ENST00000454808 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
PGAM5-202ENST00000454808 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
PGAM5-202ENST00000454808 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
PGAM5-202ENST00000454808 CFTRP13569 1480 aa23.14■■□□□ 1.29
PGAM5-202ENST00000454808 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
PGAM5-202ENST00000454808 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
PGAM5-202ENST00000454808 CUX2O14529 1486 aa23.06■■□□□ 1.28
PGAM5-202ENST00000454808 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
PGAM5-202ENST00000454808 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
PGAM5-202ENST00000454808 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
PGAM5-202ENST00000454808 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
PGAM5-202ENST00000454808 WDR62O43379 1518 aa22.88■■□□□ 1.25
PGAM5-202ENST00000454808 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
PGAM5-202ENST00000454808 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
PGAM5-202ENST00000454808 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
PGAM5-202ENST00000454808 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
PGAM5-202ENST00000454808 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
PGAM5-202ENST00000454808 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
PGAM5-202ENST00000454808 CUX1P39880 1505 aa22.48■■□□□ 1.19
PGAM5-202ENST00000454808 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
PGAM5-202ENST00000454808 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
PGAM5-202ENST00000454808 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
PGAM5-202ENST00000454808 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
PGAM5-202ENST00000454808 SOGA1O94964 1423 aa22.37■■□□□ 1.17
PGAM5-202ENST00000454808 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
PGAM5-202ENST00000454808 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
PGAM5-202ENST00000454808 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
PGAM5-202ENST00000454808 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
PGAM5-202ENST00000454808 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
PGAM5-202ENST00000454808 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
PGAM5-202ENST00000454808 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
PGAM5-202ENST00000454808 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
PGAM5-202ENST00000454808 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.162e-6■■■■■ 33.2
PGAM5-202ENST00000454808 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
PGAM5-202ENST00000454808 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
PGAM5-202ENST00000454808 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
PGAM5-202ENST00000454808 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
PGAM5-202ENST00000454808 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
PGAM5-202ENST00000454808 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
PGAM5-202ENST00000454808 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
PGAM5-202ENST00000454808 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
PGAM5-202ENST00000454808 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
PGAM5-202ENST00000454808 CHD1O14646 1710 aa22.09■■□□□ 1.13
PGAM5-202ENST00000454808 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
PGAM5-202ENST00000454808 FBLN2P98095 1184 aa22.02■■□□□ 1.12
PGAM5-202ENST00000454808 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
PGAM5-202ENST00000454808 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
PGAM5-202ENST00000454808 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
PGAM5-202ENST00000454808 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
PGAM5-202ENST00000454808 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
PGAM5-202ENST00000454808 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
PGAM5-202ENST00000454808 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
PGAM5-202ENST00000454808 GRIN2AQ12879 1464 aa21.83■■□□□ 1.08
PGAM5-202ENST00000454808 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
PGAM5-202ENST00000454808 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
PGAM5-202ENST00000454808 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
PGAM5-202ENST00000454808 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
PGAM5-202ENST00000454808 CUL7Q14999 1698 aa21.77■■□□□ 1.08
PGAM5-202ENST00000454808 IGF1RP08069 1367 aa21.76■■□□□ 1.07
PGAM5-202ENST00000454808 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
PGAM5-202ENST00000454808 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
PGAM5-202ENST00000454808 NUP160Q12769 1436 aa21.72■■□□□ 1.07
PGAM5-202ENST00000454808 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
PGAM5-202ENST00000454808 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms