Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
UPK2O00526 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.38■□□□□ 0.85
UPK2O00526 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK2O00526 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.37■□□□□ 0.85
UPK2O00526 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.37■□□□□ 0.85
UPK2O00526 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPK2O00526 MIR3665-201ENST00000578708 105 ntBASIC20.36■□□□□ 0.85
UPK2O00526 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPK2O00526 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 WHAMMP2-203ENST00000563942 1603 ntBASIC20.35■□□□□ 0.85
UPK2O00526 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.35■□□□□ 0.85
UPK2O00526 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK2O00526 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPK2O00526 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UPK2O00526 LINC00273-201ENST00000539813 1452 ntBASIC20.34■□□□□ 0.85
UPK2O00526 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPK2O00526 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPK2O00526 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
UPK2O00526 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPK2O00526 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
UPK2O00526 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UPK2O00526 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UPK2O00526 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPK2O00526 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPK2O00526 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UPK2O00526 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK2O00526 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK2O00526 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.31■□□□□ 0.84
UPK2O00526 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.31■□□□□ 0.84
UPK2O00526 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.31■□□□□ 0.84
UPK2O00526 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPK2O00526 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 AP006261.1-201ENST00000584783 668 ntBASIC20.3■□□□□ 0.84
UPK2O00526 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK2O00526 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK2O00526 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK2O00526 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.29■□□□□ 0.84
UPK2O00526 AC018358.1-201ENST00000631079 1402 ntBASIC20.28■□□□□ 0.84
UPK2O00526 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.27■□□□□ 0.84
UPK2O00526 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK2O00526 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPK2O00526 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UPK2O00526 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.25■□□□□ 0.83
UPK2O00526 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK2O00526 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UPK2O00526 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UPK2O00526 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK2O00526 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPK2O00526 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK2O00526 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK2O00526 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UPK2O00526 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK2O00526 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.23■□□□□ 0.83
UPK2O00526 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.23■□□□□ 0.83
UPK2O00526 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK2O00526 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK2O00526 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK2O00526 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPK2O00526 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK2O00526 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.22■□□□□ 0.83
UPK2O00526 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK2O00526 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UPK2O00526 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
UPK2O00526 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK2O00526 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.21■□□□□ 0.83
UPK2O00526 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.21■□□□□ 0.83
UPK2O00526 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UPK2O00526 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK2O00526 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
UPK2O00526 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
UPK2O00526 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK2O00526 AC087741.3-201ENST00000624270 1347 ntBASIC20.21■□□□□ 0.83
UPK2O00526 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK2O00526 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UPK2O00526 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK2O00526 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK2O00526 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK2O00526 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK2O00526 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK2O00526 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK2O00526 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.19■□□□□ 0.82
UPK2O00526 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms