Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HMGB1P27-201ENST00000431429 603 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 RNU7-66P-201ENST00000459469 62 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 CCDC34P1-201ENST00000507441 517 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 RNA5SP116-201ENST00000516132 98 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 SNORA31.9-201ENST00000516429 84 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 RNU6-273P-201ENST00000516937 96 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC090136.1-201ENST00000520009 240 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AP005597.4-201ENST00000526762 229 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AP001781.1-201ENST00000530977 207 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL121603.1-201ENST00000553815 142 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL121576.1-201ENST00000556055 276 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC093249.1-201ENST00000567049 203 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC069061.3-201ENST00000582254 823 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 APOOP1-201ENST00000604695 592 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 CTHRC1P1-201ENST00000605383 469 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC009570.1-201ENST00000609599 745 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL365204.3-201ENST00000612448 685 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC103705.1-201ENST00000619013 241 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RNU6-525P-201ENST00000363685 104 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RNA5SP387-201ENST00000364226 106 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 UBE2V1P2-201ENST00000397758 440 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RNU4-64P-201ENST00000410795 131 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 VN1R36P-201ENST00000414936 291 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AL591704.1-201ENST00000432574 275 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 GAPDHP27-201ENST00000447427 1020 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC104058.1-201ENST00000448028 297 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 NUTF2P3-201ENST00000448540 384 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 MTND4P17-201ENST00000470444 350 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC128716.1-201ENST00000475129 166 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 VN1R104P-201ENST00000505115 1009 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RBBP4P6-201ENST00000508098 202 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 GMPSP1-201ENST00000514075 579 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RNU6-566P-201ENST00000516790 107 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 RNA5SP143-201ENST00000516936 115 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC022360.1-201ENST00000521058 340 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC084783.1-201ENST00000565846 910 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 MIR4790-201ENST00000577799 79 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 MIR5583-1-201ENST00000580941 59 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 POLR3GP2-201ENST00000588366 668 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC024220.1-201ENST00000603675 484 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 CYP2C61P-201ENST00000604072 290 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 ARF4P1-201ENST00000605447 541 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 FAM27B-201ENST00000610601 213 ntBASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM88BA6NKF7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AL365440.1-201ENST00000436135 2167 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RN7SKP153-201ENST00000365026 316 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 Y_RNA.394-201ENST00000383942 103 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 Y_RNA.422-201ENST00000384054 114 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RNU6-434P-201ENST00000384376 107 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RNU6-1127P-201ENST00000384580 107 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RNU6-882P-201ENST00000391025 103 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RPS26P8-201ENST00000393490 348 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms