RNA–Protein interactions for RNA: ENST00000613445.4

SLC1A3-216, Transcript of solute carrier family 1 member 3, humanhuman

TSL 5 BASIC

Gene SLC1A3, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-216ENST00000613445 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
SLC1A3-216ENST00000613445 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
SLC1A3-216ENST00000613445 ABCC9O60706 1549 aa9.71□□□□□ -0.86
SLC1A3-216ENST00000613445 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
SLC1A3-216ENST00000613445 MYO15BQ96JP2 1530 aa9.54□□□□□ -0.88
SLC1A3-216ENST00000613445 NACADO15069 1562 aa9.53□□□□□ -0.88
SLC1A3-216ENST00000613445 DCAF1Q9Y4B6 1507 aa9.52□□□□□ -0.89
SLC1A3-216ENST00000613445 ZCCHC6Q5VYS8 1495 aaKnown RBP9.52□□□□□ -0.89
SLC1A3-216ENST00000613445 RB1CC1Q8TDY2 1594 aa9.5□□□□□ -0.89
SLC1A3-216ENST00000613445 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
SLC1A3-216ENST00000613445 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.94
SLC1A3-216ENST00000613445 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
SLC1A3-216ENST00000613445 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
SLC1A3-216ENST00000613445 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
SLC1A3-216ENST00000613445 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.98
SLC1A3-216ENST00000613445 BAZ1AQ9NRL2 1556 aaPredicted RBP8.85□□□□□ -0.99
SLC1A3-216ENST00000613445 CC2D2AQ9P2K1 1620 aa8.83□□□□□ -1
SLC1A3-216ENST00000613445 SMARCA4P51532 1647 aa8.82□□□□□ -1
SLC1A3-216ENST00000613445 SMARCA2P51531 1590 aa8.79□□□□□ -1
SLC1A3-216ENST00000613445 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
SLC1A3-216ENST00000613445 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
SLC1A3-216ENST00000613445 DNAJC5BQ9UF47 199 aa8.77□□□□□ -1.01
SLC1A3-216ENST00000613445 NCAPD3P42695 1498 aa8.76□□□□□ -1.01
SLC1A3-216ENST00000613445 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
SLC1A3-216ENST00000613445 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
SLC1A3-216ENST00000613445 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
SLC1A3-216ENST00000613445 RSF1Q96T23 1441 aaPredicted RBP8.69□□□□□ -1.02
SLC1A3-216ENST00000613445 BAZ1BQ9UIG0 1483 aaKnown RBP8.69□□□□□ -1.02
SLC1A3-216ENST00000613445 AEBP2Q6ZN18 517 aaPredicted RBP8.68□□□□□ -1.02
SLC1A3-216ENST00000613445 WIZO95785 1651 aa8.64□□□□□ -1.03
SLC1A3-216ENST00000613445 HRCP23327 699 aa8.64□□□□□ -1.03
SLC1A3-216ENST00000613445 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
SLC1A3-216ENST00000613445 CHIC1Q5VXU3 224 aa8.6□□□□□ -1.03
SLC1A3-216ENST00000613445 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
SLC1A3-216ENST00000613445 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
SLC1A3-216ENST00000613445 LAMC3Q9Y6N6 1575 aa8.53□□□□□ -1.04
SLC1A3-216ENST00000613445 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
SLC1A3-216ENST00000613445 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
SLC1A3-216ENST00000613445 PDS5BQ9NTI5 1447 aa8.46□□□□□ -1.05
SLC1A3-216ENST00000613445 CFTRP13569 1480 aa8.46□□□□□ -1.05
SLC1A3-216ENST00000613445 PRDM2Q13029 1718 aa8.45□□□□□ -1.06
SLC1A3-216ENST00000613445 ERCC6Q03468 1493 aa8.41□□□□□ -1.06
SLC1A3-216ENST00000613445 NESP48681 1621 aa8.41□□□□□ -1.06
SLC1A3-216ENST00000613445 PPARGC1BQ86YN6 1023 aaKnown RBP8.39□□□□□ -1.07
SLC1A3-216ENST00000613445 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
SLC1A3-216ENST00000613445 CEP164Q9UPV0 1460 aa8.38□□□□□ -1.07
SLC1A3-216ENST00000613445 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
SLC1A3-216ENST00000613445 KIF21AQ7Z4S6 1674 aa8.36□□□□□ -1.07
SLC1A3-216ENST00000613445 CUX2O14529 1486 aa8.36□□□□□ -1.07
SLC1A3-216ENST00000613445 ABCC8Q09428 1581 aa8.35□□□□□ -1.07
SLC1A3-216ENST00000613445 MRC2Q9UBG0 1479 aa8.35□□□□□ -1.07
SLC1A3-216ENST00000613445 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
SLC1A3-216ENST00000613445 THOC2Q8NI27 1593 aaKnown RBP8.34□□□□□ -1.07
SLC1A3-216ENST00000613445 WDR62O43379 1518 aa8.32□□□□□ -1.08
SLC1A3-216ENST00000613445 DNMBPQ6XZF7 1577 aa8.28□□□□□ -1.08
SLC1A3-216ENST00000613445 LOC105371045A0A1W2PR82 267 aa8.27□□□□□ -1.08
SLC1A3-216ENST00000613445 URB2Q14146 1524 aaKnown RBP8.26□□□□□ -1.09
SLC1A3-216ENST00000613445 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
SLC1A3-216ENST00000613445 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
SLC1A3-216ENST00000613445 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
SLC1A3-216ENST00000613445 WDR97A6NE52 1622 aa8.22□□□□□ -1.09
SLC1A3-216ENST00000613445 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.09
SLC1A3-216ENST00000613445 WRNQ14191 1432 aaPredicted RBP eCLIP8.21□□□□□ -1.1
SLC1A3-216ENST00000613445 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
SLC1A3-216ENST00000613445 CUX1P39880 1505 aa8.2□□□□□ -1.1
SLC1A3-216ENST00000613445 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
SLC1A3-216ENST00000613445 TRHP20396 242 aaPredicted RBP8.2□□□□□ -1.1
SLC1A3-216ENST00000613445 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
SLC1A3-216ENST00000613445 EHMT2Q96KQ7 1210 aa8.17□□□□□ -1.1
SLC1A3-216ENST00000613445 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
SLC1A3-216ENST00000613445 SOGA1O94964 1423 aa8.16□□□□□ -1.1
SLC1A3-216ENST00000613445 TARBP1Q13395 1621 aaKnown RBP8.16□□□□□ -1.1
SLC1A3-216ENST00000613445 FBLN2P98095 1184 aa8.16□□□□□ -1.1
SLC1A3-216ENST00000613445 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
SLC1A3-216ENST00000613445 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
SLC1A3-216ENST00000613445 SCAF1Q9H7N4 1312 aaKnown RBP8.1□□□□□ -1.11
SLC1A3-216ENST00000613445 RAD54L2Q9Y4B4 1467 aa8.1□□□□□ -1.11
SLC1A3-216ENST00000613445 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
SLC1A3-216ENST00000613445 FAM9AQ8IZU1 332 aaPredicted RBP8.08□□□□□ -1.12
SLC1A3-216ENST00000613445 ABCA5Q8WWZ7 1642 aa8.08□□□□□ -1.12
SLC1A3-216ENST00000613445 GRIN2BQ13224 1484 aa8.08□□□□□ -1.12
SLC1A3-216ENST00000613445 ZEB1P37275 1124 aaPredicted RBP8.08□□□□□ -1.12
SLC1A3-216ENST00000613445 ZNF608Q9ULD9 1512 aaPredicted RBP8.07□□□□□ -1.12
SLC1A3-216ENST00000613445 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
SLC1A3-216ENST00000613445 MAGI1Q96QZ7 1491 aaPredicted RBP8.07□□□□□ -1.12
SLC1A3-216ENST00000613445 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
SLC1A3-216ENST00000613445 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
SLC1A3-216ENST00000613445 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
SLC1A3-216ENST00000613445 AQRO60306 1485 aaKnown RBP eCLIP8.05□□□□□ -1.12
SLC1A3-216ENST00000613445 TDRD9Q8NDG6 1382 aaKnown RBP8.05□□□□□ -1.12
SLC1A3-216ENST00000613445 EEA1Q15075 1411 aa8.02□□□□□ -1.13
SLC1A3-216ENST00000613445 PLPPR3Q6T4P5 718 aa8.02□□□□□ -1.13
SLC1A3-216ENST00000613445 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
SLC1A3-216ENST00000613445 CUL7Q14999 1698 aa8.01□□□□□ -1.13
SLC1A3-216ENST00000613445 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
SLC1A3-216ENST00000613445 SNAPC4Q5SXM2 1469 aa8.01□□□□□ -1.13
SLC1A3-216ENST00000613445 FHAD1B1AJZ9 1412 aa8.01□□□□□ -1.13
SLC1A3-216ENST00000613445 PELP1Q8IZL8 1130 aaKnown RBP8.01□□□□□ -1.13
SLC1A3-216ENST00000613445 ADAMTS12P58397 1594 aa8□□□□□ -1.13
SLC1A3-216ENST00000613445 OSCARQ8IYS5 282 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms