Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC120498.9-201ENST00000339021 3867 ntBASIC18.56■□□□□ 0.56
KRT78Q8N1N4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KRT78Q8N1N4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 AL160286.2-201ENST00000567150 934 ntBASIC18.55■□□□□ 0.56
KRT78Q8N1N4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 HLA-A-209ENST00000638375 975 ntBASIC18.55■□□□□ 0.56
KRT78Q8N1N4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT78Q8N1N4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 AL353807.1-201ENST00000427475 662 ntBASIC18.54■□□□□ 0.56
KRT78Q8N1N4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 AL359736.2-201ENST00000621992 437 ntBASIC18.54■□□□□ 0.56
KRT78Q8N1N4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 SDHAP1-207ENST00000440850 2000 ntBASIC18.54■□□□□ 0.56
KRT78Q8N1N4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT78Q8N1N4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 HTR7P1-201ENST00000538670 1336 ntBASIC18.53■□□□□ 0.56
KRT78Q8N1N4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 AP002982.1-201ENST00000492365 877 ntBASIC18.53■□□□□ 0.56
KRT78Q8N1N4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT78Q8N1N4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms