Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.99
COL1A2P08123 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
COL1A2P08123 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.2■□□□□ 0.98
COL1A2P08123 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
COL1A2P08123 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 AK4P3-201ENST00000418260 669 ntBASIC21.2■□□□□ 0.98
COL1A2P08123 AC117947.1-201ENST00000427448 529 ntBASIC21.2■□□□□ 0.98
COL1A2P08123 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL1A2P08123 AC141257.4-201ENST00000634557 245 ntBASIC21.2■□□□□ 0.98
COL1A2P08123 AC136944.6-201ENST00000634818 245 ntBASIC21.2■□□□□ 0.98
COL1A2P08123 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A2P08123 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.19■□□□□ 0.98
COL1A2P08123 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL1A2P08123 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.19■□□□□ 0.98
COL1A2P08123 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.19■□□□□ 0.98
COL1A2P08123 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.19■□□□□ 0.98
COL1A2P08123 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL1A2P08123 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.19■□□□□ 0.98
COL1A2P08123 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COL1A2P08123 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.19■□□□□ 0.98
COL1A2P08123 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.19■□□□□ 0.98
COL1A2P08123 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL1A2P08123 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.19■□□□□ 0.98
COL1A2P08123 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 AC112907.3-201ENST00000577781 2400 ntBASIC21.18■□□□□ 0.98
COL1A2P08123 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
COL1A2P08123 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.18■□□□□ 0.98
COL1A2P08123 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 ARMC10P1-201ENST00000313754 855 ntBASIC21.18■□□□□ 0.98
COL1A2P08123 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.18■□□□□ 0.98
COL1A2P08123 AC063952.2-201ENST00000498792 1227 ntBASIC21.18■□□□□ 0.98
COL1A2P08123 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.18■□□□□ 0.98
COL1A2P08123 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 AC022616.7-201ENST00000525383 220 ntBASIC21.18■□□□□ 0.98
COL1A2P08123 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL1A2P08123 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.18■□□□□ 0.98
COL1A2P08123 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL1A2P08123 SDHAP1-207ENST00000440850 2000 ntBASIC21.18■□□□□ 0.98
COL1A2P08123 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.17■□□□□ 0.98
COL1A2P08123 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL1A2P08123 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
COL1A2P08123 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.17■□□□□ 0.98
COL1A2P08123 COX11P1-201ENST00000489116 835 ntBASIC21.17■□□□□ 0.98
COL1A2P08123 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.17■□□□□ 0.98
COL1A2P08123 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.17■□□□□ 0.98
COL1A2P08123 WWOX-216ENST00000569818 525 ntBASIC21.17■□□□□ 0.98
COL1A2P08123 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 NTF6B-201ENST00000591913 560 ntBASIC21.17■□□□□ 0.98
COL1A2P08123 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL1A2P08123 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.17■□□□□ 0.98
COL1A2P08123 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL1A2P08123 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms