Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.75■□□□□ 0.27
SFTPBP07988 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SFTPBP07988 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SFTPBP07988 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.75■□□□□ 0.27
SFTPBP07988 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.75■□□□□ 0.27
SFTPBP07988 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.75■□□□□ 0.27
SFTPBP07988 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.75■□□□□ 0.27
SFTPBP07988 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SFTPBP07988 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.75■□□□□ 0.27
SFTPBP07988 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SFTPBP07988 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SFTPBP07988 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFTPBP07988 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.74■□□□□ 0.27
SFTPBP07988 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SFTPBP07988 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
SFTPBP07988 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.74■□□□□ 0.27
SFTPBP07988 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.74■□□□□ 0.27
SFTPBP07988 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.74■□□□□ 0.27
SFTPBP07988 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.74■□□□□ 0.27
SFTPBP07988 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.74■□□□□ 0.27
SFTPBP07988 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 AC026471.1-201ENST00000564629 3026 ntBASIC16.74■□□□□ 0.27
SFTPBP07988 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SFTPBP07988 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.73■□□□□ 0.27
SFTPBP07988 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.73■□□□□ 0.27
SFTPBP07988 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.73■□□□□ 0.27
SFTPBP07988 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.73■□□□□ 0.27
SFTPBP07988 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SFTPBP07988 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.72■□□□□ 0.27
SFTPBP07988 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.72■□□□□ 0.27
SFTPBP07988 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SFTPBP07988 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms