Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.34■■□□□ 1.01
COL1A2P08123 ATP5G1P1-201ENST00000448724 379 ntBASIC21.34■■□□□ 1.01
COL1A2P08123 AL049597.2-201ENST00000565575 961 ntBASIC21.34■■□□□ 1.01
COL1A2P08123 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.34■■□□□ 1.01
COL1A2P08123 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
COL1A2P08123 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COL1A2P08123 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL1A2P08123 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A2P08123 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL1A2P08123 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.33■■□□□ 1.01
COL1A2P08123 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL1A2P08123 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A2P08123 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.33■■□□□ 1.01
COL1A2P08123 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A2P08123 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.33■■□□□ 1.01
COL1A2P08123 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL1A2P08123 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.33■■□□□ 1
COL1A2P08123 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.33■■□□□ 1
COL1A2P08123 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.33■■□□□ 1
COL1A2P08123 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
COL1A2P08123 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A2P08123 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL1A2P08123 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.32■■□□□ 1
COL1A2P08123 ZNF815P-204ENST00000434898 1737 ntBASIC21.32■■□□□ 1
COL1A2P08123 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
COL1A2P08123 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 AC104417.2-201ENST00000562989 1793 ntBASIC21.32■■□□□ 1
COL1A2P08123 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.32■■□□□ 1
COL1A2P08123 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 AL157384.1-201ENST00000445995 2473 ntBASIC21.32■■□□□ 1
COL1A2P08123 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.32■■□□□ 1
COL1A2P08123 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.32■■□□□ 1
COL1A2P08123 AL353719.1-201ENST00000566847 864 ntBASIC21.32■■□□□ 1
COL1A2P08123 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 LINC01521-201ENST00000504184 1943 ntBASIC21.32■■□□□ 1
COL1A2P08123 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COL1A2P08123 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A2P08123 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 KRT8P11-201ENST00000409686 1436 ntBASIC21.31■■□□□ 1
COL1A2P08123 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.31■■□□□ 1
COL1A2P08123 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.31■■□□□ 1
COL1A2P08123 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.31■■□□□ 1
COL1A2P08123 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL1A2P08123 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.31■■□□□ 1
COL1A2P08123 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.31■■□□□ 1
COL1A2P08123 AL590326.2-201ENST00000625139 305 ntBASIC21.31■■□□□ 1
COL1A2P08123 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.31■■□□□ 1
COL1A2P08123 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A2P08123 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL1A2P08123 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.31■■□□□ 1
COL1A2P08123 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL1A2P08123 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
COL1A2P08123 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.3■■□□□ 1
COL1A2P08123 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.3■■□□□ 1
COL1A2P08123 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.3■■□□□ 1
COL1A2P08123 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.3■■□□□ 1
COL1A2P08123 AL445228.2-201ENST00000605589 952 ntBASIC21.3■■□□□ 1
COL1A2P08123 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.3■■□□□ 1
COL1A2P08123 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.3■■□□□ 1
COL1A2P08123 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.3■■□□□ 1
COL1A2P08123 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL1A2P08123 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms