Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV1A0A0A0MS02 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 PNMA6B-201ENST00000538162 1200 ntBASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 AC083880.1-201ENST00000608266 535 ntBASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 OR6D1P-202ENST00000641007 5290 ntBASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV1A0A0A0MS02 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 AC116351.2-201ENST00000606540 1585 ntBASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 RPS2P52-201ENST00000469610 820 ntBASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRGV1A0A0A0MS02 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AC124283.5-201ENST00000624661 1809 ntBASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRGV1A0A0A0MS02 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms