Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM56-RWDD3S4R434 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 AC104581.1-202ENST00000635932 2618 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 KRT18P68-201ENST00000392293 1000 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 RARRES2P4-201ENST00000514074 484 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 AC013268.1-206ENST00000638368 961 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 AC112229.1-201ENST00000639295 961 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 AC093525.10-201ENST00000625130 1569 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 AL031598.1-201ENST00000561511 1773 ntBASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM56-RWDD3S4R434 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 AL390961.4-201ENST00000623958 2535 ntBASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM56-RWDD3S4R434 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 AC090164.3-201ENST00000610780 2143 ntBASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 KRT18P61-201ENST00000585825 1298 ntBASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 Z98044.1-201ENST00000632503 1764 ntBASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM56-RWDD3S4R434 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms