Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 CD99P1-205ENST00000527459 561 ntBASIC18.83■□□□□ 0.6
KRT78Q8N1N4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT78Q8N1N4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.83■□□□□ 0.6
KRT78Q8N1N4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.82■□□□□ 0.6
KRT78Q8N1N4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.82■□□□□ 0.6
KRT78Q8N1N4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT78Q8N1N4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KRT78Q8N1N4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT78Q8N1N4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 AC069544.1-201ENST00000609399 999 ntBASIC18.79■□□□□ 0.6
KRT78Q8N1N4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms