Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC30.75■■■□□ 2.51
PPARGC1BQ86YN6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PPARGC1BQ86YN6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PPARGC1BQ86YN6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PPARGC1BQ86YN6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 Six3os1_6.1-201ENST00000620790 196 ntBASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 TNXA-203ENST00000507684 2038 ntBASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 AC116351.2-201ENST00000606540 1585 ntBASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PPARGC1BQ86YN6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 AC069544.1-201ENST00000609399 999 ntBASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC30.73■■■□□ 2.51
PPARGC1BQ86YN6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 TFP1-202ENST00000475455 1573 ntBASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 AL023875.1-201ENST00000640777 796 ntBASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.72■■■□□ 2.51
PPARGC1BQ86YN6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PPARGC1BQ86YN6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPARGC1BQ86YN6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PPARGC1BQ86YN6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PPARGC1BQ86YN6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PPARGC1BQ86YN6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 PRORSD1P-201ENST00000295112 541 ntBASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 FAM201B-201ENST00000458407 597 ntBASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 TMEM179-206ENST00000616017 1645 ntBASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PPARGC1BQ86YN6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms