Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R1Q8TF05 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.45■■□□□ 1.66
PPP4R1Q8TF05 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R1Q8TF05 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R1Q8TF05 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.44■■□□□ 1.66
PPP4R1Q8TF05 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R1Q8TF05 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R1Q8TF05 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R1Q8TF05 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R1Q8TF05 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R1Q8TF05 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.41■■□□□ 1.66
PPP4R1Q8TF05 MIR3665-201ENST00000578708 105 ntBASIC25.41■■□□□ 1.66
PPP4R1Q8TF05 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPP4R1Q8TF05 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.41■■□□□ 1.66
PPP4R1Q8TF05 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.4■■□□□ 1.66
PPP4R1Q8TF05 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
PPP4R1Q8TF05 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.4■■□□□ 1.66
PPP4R1Q8TF05 BX255925.1-201ENST00000566954 1854 ntBASIC25.4■■□□□ 1.66
PPP4R1Q8TF05 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.4■■□□□ 1.66
PPP4R1Q8TF05 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.39■■□□□ 1.66
PPP4R1Q8TF05 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R1Q8TF05 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R1Q8TF05 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R1Q8TF05 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PPP4R1Q8TF05 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.38■■□□□ 1.65
PPP4R1Q8TF05 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.37■■□□□ 1.65
PPP4R1Q8TF05 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.37■■□□□ 1.65
PPP4R1Q8TF05 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R1Q8TF05 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R1Q8TF05 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PPP4R1Q8TF05 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R1Q8TF05 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R1Q8TF05 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.36■■□□□ 1.65
PPP4R1Q8TF05 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R1Q8TF05 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PPP4R1Q8TF05 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
PPP4R1Q8TF05 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R1Q8TF05 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PPP4R1Q8TF05 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R1Q8TF05 AP004833.2-201ENST00000532228 1454 ntBASIC25.34■■□□□ 1.65
PPP4R1Q8TF05 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.33■■□□□ 1.65
PPP4R1Q8TF05 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R1Q8TF05 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R1Q8TF05 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R1Q8TF05 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R1Q8TF05 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PPP4R1Q8TF05 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.32■■□□□ 1.64
PPP4R1Q8TF05 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R1Q8TF05 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R1Q8TF05 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PPP4R1Q8TF05 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R1Q8TF05 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R1Q8TF05 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R1Q8TF05 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R1Q8TF05 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R1Q8TF05 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R1Q8TF05 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PPP4R1Q8TF05 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R1Q8TF05 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R1Q8TF05 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R1Q8TF05 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.26■■□□□ 1.63
PPP4R1Q8TF05 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R1Q8TF05 MIR762-201ENST00000390236 83 ntBASIC25.26■■□□□ 1.63
PPP4R1Q8TF05 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 DUX4L28-201ENST00000623687 678 ntBASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 AC087741.3-201ENST00000624270 1347 ntBASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R1Q8TF05 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.24■■□□□ 1.63
PPP4R1Q8TF05 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R1Q8TF05 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
PPP4R1Q8TF05 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
PPP4R1Q8TF05 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.23■■□□□ 1.63
PPP4R1Q8TF05 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R1Q8TF05 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R1Q8TF05 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms