Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 YOX1YML027W 1158 nt12.66□□□□□ -0.38
UFD4P33202 CYS3YAL012W 1185 nt12.65□□□□□ -0.38
UFD4P33202 ATP23YNR020C 813 nt12.62□□□□□ -0.39
UFD4P33202 ZAP1YJL056C 2643 nt12.62□□□□□ -0.39
UFD4P33202 PUS4YNL292W 1212 nt12.61□□□□□ -0.39
UFD4P33202 PNS1YOR161C 1620 nt12.6□□□□□ -0.39
UFD4P33202 THI73YLR004C 1572 nt12.6□□□□□ -0.39
UFD4P33202 RIM8YGL045W 1629 nt12.59□□□□□ -0.39
UFD4P33202 ESBP6YNL125C 2022 nt12.59□□□□□ -0.39
UFD4P33202 APT1YML022W 564 nt12.59□□□□□ -0.39
UFD4P33202 SPR1YOR190W 1338 nt12.58□□□□□ -0.39
UFD4P33202 HIS2YFR025C 1008 nt12.58□□□□□ -0.4
UFD4P33202 POR2YIL114C 846 nt12.58□□□□□ -0.4
UFD4P33202 CPT1YNL130C 1182 nt12.57□□□□□ -0.4
UFD4P33202 ODC1YPL134C 933 nt12.56□□□□□ -0.4
UFD4P33202 YMR209CYMR209C 1374 nt12.55□□□□□ -0.4
UFD4P33202 YBL111CYBL111C 2004 nt12.55□□□□□ -0.4
UFD4P33202 GAL83YER027C 1254 nt12.52□□□□□ -0.41
UFD4P33202 AVO2YMR068W 1281 nt12.51□□□□□ -0.41
UFD4P33202 JHD1YER051W 1479 nt12.5□□□□□ -0.41
UFD4P33202 PUP3YER094C 618 nt12.5□□□□□ -0.41
UFD4P33202 SSL2YIL143C 2532 nt12.5□□□□□ -0.41
UFD4P33202 SPE3YPR069C 882 nt12.47□□□□□ -0.41
UFD4P33202 RPD3YNL330C 1302 nt12.47□□□□□ -0.41
UFD4P33202 AIM46YHR199C 933 nt12.46□□□□□ -0.41
UFD4P33202 THI3YDL080C 1830 nt12.45□□□□□ -0.42
UFD4P33202 YMR316C-BYMR316C-B 309 nt12.45□□□□□ -0.42
UFD4P33202 MCP1YOR228C 909 nt12.44□□□□□ -0.42
UFD4P33202 MEP1YGR121C 1479 nt12.43□□□□□ -0.42
UFD4P33202 PMP3YDR276C 168 nt12.42□□□□□ -0.42
UFD4P33202 GGA2YHR108W 1758 nt12.42□□□□□ -0.42
UFD4P33202 ZIM17YNL310C 525 nt12.41□□□□□ -0.42
UFD4P33202 TIM50YPL063W 1431 nt12.41□□□□□ -0.42
UFD4P33202 CST26YBR042C 1194 nt12.39□□□□□ -0.43
UFD4P33202 YPQ1YOL092W 927 nt12.38□□□□□ -0.43
UFD4P33202 YGL114WYGL114W 2178 nt12.37□□□□□ -0.43
UFD4P33202 PMU1YKL128C 888 nt12.36□□□□□ -0.43
UFD4P33202 MBF1YOR298C-A 456 nt12.36□□□□□ -0.43
UFD4P33202 YIR035CYIR035C 765 nt12.35□□□□□ -0.43
UFD4P33202 RPC31YNL151C 756 nt12.35□□□□□ -0.43
UFD4P33202 PLB3YOL011W 2061 nt12.35□□□□□ -0.43
UFD4P33202 CRN1YLR429W 1956 nt12.34□□□□□ -0.43
UFD4P33202 ADH6YMR318C 1083 nt12.34□□□□□ -0.43
UFD4P33202 PRE10YOR362C 867 nt12.33□□□□□ -0.44
UFD4P33202 BUB2YMR055C 921 nt12.32□□□□□ -0.44
UFD4P33202 HXT8YJL214W 1710 nt12.31□□□□□ -0.44
UFD4P33202 TRR2YHR106W 1029 nt12.29□□□□□ -0.44
UFD4P33202 GPM1YKL152C 744 nt12.28□□□□□ -0.44
UFD4P33202 TMS1YDR105C 1422 nt12.28□□□□□ -0.44
UFD4P33202 YLR184WYLR184W 348 nt12.27□□□□□ -0.44
UFD4P33202 PTH2YBL057C 627 nt12.27□□□□□ -0.44
UFD4P33202 LGE1YPL055C 999 nt12.27□□□□□ -0.44
UFD4P33202 CKI1YLR133W 1749 nt12.27□□□□□ -0.45
UFD4P33202 MDM35YKL053C-A 261 nt12.26□□□□□ -0.45
UFD4P33202 CWP2YKL096W-A 279 nt12.26□□□□□ -0.45
UFD4P33202 AAC3YBR085W 924 nt12.26□□□□□ -0.45
UFD4P33202 YJL009WYJL009W 327 nt12.25□□□□□ -0.45
UFD4P33202 AAD14YNL331C 1131 nt12.25□□□□□ -0.45
UFD4P33202 MPH3YJR160C 1809 nt12.25□□□□□ -0.45
UFD4P33202 BIO3YNR058W 1443 nt12.24□□□□□ -0.45
UFD4P33202 YMR074CYMR074C 438 nt12.24□□□□□ -0.45
UFD4P33202 DPL1YDR294C 1770 nt12.23□□□□□ -0.45
UFD4P33202 NMA2YGR010W 1188 nt12.23□□□□□ -0.45
UFD4P33202 YDR467CYDR467C 327 nt12.22□□□□□ -0.45
UFD4P33202 YPL067CYPL067C 597 nt12.22□□□□□ -0.45
UFD4P33202 PSD1YNL169C 1503 nt12.21□□□□□ -0.46
UFD4P33202 YJR142WYJR142W 1029 nt12.21□□□□□ -0.46
UFD4P33202 LDB7YBL006C 543 nt12.21□□□□□ -0.46
UFD4P33202 YHR218WYHR218W 1812 nt12.2□□□□□ -0.46
UFD4P33202 DMA2YNL116W 1569 nt12.2□□□□□ -0.46
UFD4P33202 HXT10YFL011W 1641 nt12.19□□□□□ -0.46
UFD4P33202 LEU4YNL104C 1860 nt12.19□□□□□ -0.46
UFD4P33202 HEL2YDR266C 1920 nt12.18□□□□□ -0.46
UFD4P33202 YGL081WYGL081W 963 nt12.18□□□□□ -0.46
UFD4P33202 PRS4YBL068W 981 nt12.18□□□□□ -0.46
UFD4P33202 YBR056WYBR056W 1506 nt12.18□□□□□ -0.46
UFD4P33202 ERV2YPR037C 591 nt12.15□□□□□ -0.46
UFD4P33202 MSI1YBR195C 1269 nt12.15□□□□□ -0.46
UFD4P33202 CDC3YLR314C 1563 nt12.15□□□□□ -0.46
UFD4P33202 YER152CYER152C 1332 nt12.14□□□□□ -0.47
UFD4P33202 ARO3YDR035W 1113 nt12.13□□□□□ -0.47
UFD4P33202 PDA1YER178W 1263 nt12.13□□□□□ -0.47
UFD4P33202 CYS4YGR155W 1524 nt12.12□□□□□ -0.47
UFD4P33202 tE(CUC)DtE(CUC)D 72 nt12.11□□□□□ -0.47
UFD4P33202 tE(CUC)ItE(CUC)I 72 nt12.11□□□□□ -0.47
UFD4P33202 LRO1YNR008W 1986 nt12.1□□□□□ -0.47
UFD4P33202 ARG7YMR062C 1326 nt12.09□□□□□ -0.47
UFD4P33202 AIM20YIL158W 615 nt12.08□□□□□ -0.47
UFD4P33202 AGP3YFL055W 1677 nt12.07□□□□□ -0.48
UFD4P33202 NPP2YEL016C 1482 nt12.06□□□□□ -0.48
UFD4P33202 STS1YIR011C 960 nt12.06□□□□□ -0.48
UFD4P33202 TES1YJR019C 1050 nt12.06□□□□□ -0.48
UFD4P33202 SUN4YNL066W 1263 nt12.06□□□□□ -0.48
UFD4P33202 MRS4YKR052C 915 nt12.04□□□□□ -0.48
UFD4P33202 YMC2YBR104W 990 nt12.04□□□□□ -0.48
UFD4P33202 PSA1YDL055C 1086 nt12.02□□□□□ -0.48
UFD4P33202 QRI5YLR204W 336 nt12.02□□□□□ -0.49
UFD4P33202 RCF1YML030W 480 nt12.02□□□□□ -0.49
UFD4P33202 YML034C-AYML034C-A 399 nt12.02□□□□□ -0.49
UFD4P33202 SPS1YDR523C 1473 nt12.01□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms