Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRKNO60260 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PRKNO60260 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.92■■□□□ 1.42
PRKNO60260 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PRKNO60260 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PRKNO60260 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.91■■□□□ 1.42
PRKNO60260 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.91■■□□□ 1.42
PRKNO60260 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRKNO60260 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
PRKNO60260 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.9■■□□□ 1.42
PRKNO60260 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.9■■□□□ 1.42
PRKNO60260 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.9■■□□□ 1.42
PRKNO60260 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.9■■□□□ 1.42
PRKNO60260 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRKNO60260 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.9■■□□□ 1.42
PRKNO60260 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.9■■□□□ 1.42
PRKNO60260 CR559946.2-201ENST00000623684 991 ntBASIC23.9■■□□□ 1.42
PRKNO60260 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PRKNO60260 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
PRKNO60260 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.89■■□□□ 1.42
PRKNO60260 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PRKNO60260 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.89■■□□□ 1.41
PRKNO60260 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.89■■□□□ 1.41
PRKNO60260 MIR3648-2-201ENST00000581792 180 ntBASIC23.89■■□□□ 1.41
PRKNO60260 MIR3648-1-201ENST00000615959 180 ntBASIC23.89■■□□□ 1.41
PRKNO60260 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.89■■□□□ 1.41
PRKNO60260 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PRKNO60260 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PRKNO60260 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.88■■□□□ 1.41
PRKNO60260 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.88■■□□□ 1.41
PRKNO60260 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.88■■□□□ 1.41
PRKNO60260 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRKNO60260 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRKNO60260 HLA-V-202ENST00000446817 847 ntBASIC23.87■■□□□ 1.41
PRKNO60260 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L13-201ENST00000554103 1267 ntBASIC23.87■■□□□ 1.41
PRKNO60260 AC016575.1-201ENST00000607026 382 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L15-201ENST00000611059 1267 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L23-201ENST00000615195 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L24-201ENST00000617576 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L22-201ENST00000618238 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L20-201ENST00000619712 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L21-201ENST00000622058 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L10-201ENST00000622460 1267 ntBASIC23.87■■□□□ 1.41
PRKNO60260 DUX4L25-201ENST00000624915 1269 ntBASIC23.87■■□□□ 1.41
PRKNO60260 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.87■■□□□ 1.41
PRKNO60260 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRKNO60260 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRKNO60260 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRKNO60260 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRKNO60260 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRKNO60260 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PRKNO60260 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRKNO60260 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.84■■□□□ 1.41
PRKNO60260 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRKNO60260 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.84■■□□□ 1.41
PRKNO60260 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PRKNO60260 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.84■■□□□ 1.41
PRKNO60260 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.84■■□□□ 1.41
PRKNO60260 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PRKNO60260 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRKNO60260 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRKNO60260 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PRKNO60260 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.83■■□□□ 1.41
PRKNO60260 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.83■■□□□ 1.41
PRKNO60260 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRKNO60260 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PRKNO60260 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.82■■□□□ 1.4
PRKNO60260 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRKNO60260 AC100797.4-201ENST00000631653 1827 ntBASIC23.82■■□□□ 1.4
PRKNO60260 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRKNO60260 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRKNO60260 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PRKNO60260 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRKNO60260 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRKNO60260 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.8■■□□□ 1.4
PRKNO60260 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRKNO60260 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRKNO60260 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRKNO60260 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.78■■□□□ 1.4
PRKNO60260 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRKNO60260 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.78■■□□□ 1.4
PRKNO60260 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRKNO60260 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRKNO60260 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.77■■□□□ 1.4
PRKNO60260 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRKNO60260 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRKNO60260 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRKNO60260 MIR639-201ENST00000384974 98 ntBASIC23.76■■□□□ 1.39
PRKNO60260 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRKNO60260 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.76■■□□□ 1.39
PRKNO60260 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.75■■□□□ 1.39
PRKNO60260 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PRKNO60260 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRKNO60260 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.75■■□□□ 1.39
PRKNO60260 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRKNO60260 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.75■■□□□ 1.39
PRKNO60260 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PRKNO60260 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRKNO60260 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms