Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.41■■■□□ 2.3
AFAP1Q8N556 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
AFAP1Q8N556 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
AFAP1Q8N556 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
AFAP1Q8N556 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
AFAP1Q8N556 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
AFAP1Q8N556 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
AFAP1Q8N556 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
AFAP1Q8N556 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 ATP5G2P1-201ENST00000433580 426 ntBASIC29.4■■■□□ 2.3
AFAP1Q8N556 LY6E-213ENST00000522528 606 ntTSL 3 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
AFAP1Q8N556 AC007225.1-201ENST00000566331 1836 ntBASIC29.4■■■□□ 2.3
AFAP1Q8N556 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
AFAP1Q8N556 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
AFAP1Q8N556 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
AFAP1Q8N556 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
AFAP1Q8N556 AC246785.2-201ENST00000432512 513 ntBASIC29.39■■■□□ 2.3
AFAP1Q8N556 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.39■■■□□ 2.3
AFAP1Q8N556 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
AFAP1Q8N556 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
AFAP1Q8N556 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
AFAP1Q8N556 KRT8P41-201ENST00000533985 1514 ntBASIC29.39■■■□□ 2.3
AFAP1Q8N556 EP400NL-214ENST00000641289 2402 ntBASIC29.39■■■□□ 2.29
AFAP1Q8N556 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.29
AFAP1Q8N556 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 SPDYE13P-201ENST00000445314 798 ntBASIC29.38■■■□□ 2.29
AFAP1Q8N556 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
AFAP1Q8N556 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
AFAP1Q8N556 AC006128.1-201ENST00000624704 1661 ntBASIC29.37■■■□□ 2.29
AFAP1Q8N556 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 AL691432.3-201ENST00000621860 400 ntBASIC29.37■■■□□ 2.29
AFAP1Q8N556 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
AFAP1Q8N556 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.37■■■□□ 2.29
AFAP1Q8N556 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 AC092720.2-201ENST00000602388 1665 ntBASIC29.36■■■□□ 2.29
AFAP1Q8N556 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 WWC2-AS2-201ENST00000578387 2183 ntBASIC29.36■■■□□ 2.29
AFAP1Q8N556 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC29.36■■■□□ 2.29
AFAP1Q8N556 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
AFAP1Q8N556 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
AFAP1Q8N556 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC29.35■■■□□ 2.29
AFAP1Q8N556 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
AFAP1Q8N556 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
AFAP1Q8N556 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
AFAP1Q8N556 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.35■■■□□ 2.29
AFAP1Q8N556 GCSHP2-201ENST00000560971 527 ntBASIC29.35■■■□□ 2.29
AFAP1Q8N556 NPAP1P7-201ENST00000613027 823 ntBASIC29.35■■■□□ 2.29
AFAP1Q8N556 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
AFAP1Q8N556 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
AFAP1Q8N556 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
AFAP1Q8N556 SMG8-203ENST00000578922 2178 ntBASIC29.35■■■□□ 2.29
AFAP1Q8N556 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
AFAP1Q8N556 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
AFAP1Q8N556 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
AFAP1Q8N556 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.34■■■□□ 2.29
AFAP1Q8N556 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
AFAP1Q8N556 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
AFAP1Q8N556 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
AFAP1Q8N556 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms