Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 AL450487.1-201ENST00000426799 995 ntBASIC30.62■■■□□ 2.49
ARID3CA6NKF2 AL353719.1-201ENST00000566847 864 ntBASIC30.62■■■□□ 2.49
ARID3CA6NKF2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.62■■■□□ 2.49
ARID3CA6NKF2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARID3CA6NKF2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 KRT8P45-201ENST00000414328 1447 ntBASIC30.6■■■□□ 2.49
ARID3CA6NKF2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ARID3CA6NKF2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 AC140113.3-201ENST00000605663 199 ntBASIC30.59■■■□□ 2.49
ARID3CA6NKF2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC30.59■■■□□ 2.49
ARID3CA6NKF2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARID3CA6NKF2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.57■■■□□ 2.48
ARID3CA6NKF2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 TSPY17P-201ENST00000450329 467 ntBASIC30.57■■■□□ 2.48
ARID3CA6NKF2 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.57■■■□□ 2.48
ARID3CA6NKF2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 AP003041.3-201ENST00000527151 707 ntBASIC30.57■■■□□ 2.48
ARID3CA6NKF2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 AC116407.4-201ENST00000623319 1061 ntBASIC30.57■■■□□ 2.48
ARID3CA6NKF2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.57■■■□□ 2.48
ARID3CA6NKF2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 FXN-203ENST00000396366 922 ntTSL 2 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 HOMER2P1-201ENST00000455653 964 ntBASIC30.56■■■□□ 2.48
ARID3CA6NKF2 PRSS44-201ENST00000515154 1146 ntBASIC30.56■■■□□ 2.48
ARID3CA6NKF2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.56■■■□□ 2.48
ARID3CA6NKF2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ARID3CA6NKF2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC30.54■■■□□ 2.48
ARID3CA6NKF2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARID3CA6NKF2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ARID3CA6NKF2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms