Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.7■■■□□ 2.51
ARID3CA6NKF2 AC007225.1-201ENST00000566331 1836 ntBASIC30.7■■■□□ 2.5
ARID3CA6NKF2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC30.7■■■□□ 2.5
ARID3CA6NKF2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC30.7■■■□□ 2.5
ARID3CA6NKF2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
ARID3CA6NKF2 AC006128.1-201ENST00000624704 1661 ntBASIC30.69■■■□□ 2.5
ARID3CA6NKF2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 AL671277.2-201ENST00000458060 996 ntBASIC30.69■■■□□ 2.5
ARID3CA6NKF2 AC012313.10-201ENST00000623509 926 ntBASIC30.69■■■□□ 2.5
ARID3CA6NKF2 AL121956.5-201ENST00000625261 221 ntBASIC30.69■■■□□ 2.5
ARID3CA6NKF2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
ARID3CA6NKF2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 AC010653.2-201ENST00000623505 997 ntBASIC30.68■■■□□ 2.5
ARID3CA6NKF2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
ARID3CA6NKF2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 HCG4P8-203ENST00000443049 980 ntBASIC30.67■■■□□ 2.5
ARID3CA6NKF2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 AC005332.1-201ENST00000577698 1310 ntBASIC30.67■■■□□ 2.5
ARID3CA6NKF2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARID3CA6NKF2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 TMEM179-206ENST00000616017 1645 ntBASIC30.66■■■□□ 2.5
ARID3CA6NKF2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 AC026396.1-201ENST00000419388 421 ntBASIC30.66■■■□□ 2.5
ARID3CA6NKF2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 CLEC4GP1-201ENST00000596555 870 ntBASIC30.66■■■□□ 2.5
ARID3CA6NKF2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
ARID3CA6NKF2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARID3CA6NKF2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
ARID3CA6NKF2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.65■■■□□ 2.5
ARID3CA6NKF2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC30.65■■■□□ 2.5
ARID3CA6NKF2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ARID3CA6NKF2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
ARID3CA6NKF2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 AC092720.2-201ENST00000602388 1665 ntBASIC30.64■■■□□ 2.5
ARID3CA6NKF2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.64■■■□□ 2.5
ARID3CA6NKF2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC30.63■■■□□ 2.49
ARID3CA6NKF2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms