RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
SWI5-201ENST00000320188 ABCC9O60706 1549 aa41.54■■■■■ 4.24
SWI5-201ENST00000320188 CCDC180Q9P1Z9 1646 aa41.27■■■■■ 4.2
SWI5-201ENST00000320188 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
SWI5-201ENST00000320188 DNAJC5BQ9UF47 199 aa39.19■■■■□ 3.86
SWI5-201ENST00000320188 NACADO15069 1562 aa39.06■■■■□ 3.84
SWI5-201ENST00000320188 DCAF8L2P0C7V8 631 aa38.64■■■■□ 3.78
SWI5-201ENST00000320188 UNC13AQ9UPW8 1703 aa38.61■■■■□ 3.77
SWI5-201ENST00000320188 PABPN1Q86U42 306 aaKnown RBP eCLIP38.53■■■■□ 3.76
SWI5-201ENST00000320188 MYO15BQ96JP2 1530 aa38.35■■■■□ 3.73
SWI5-201ENST00000320188 BICRAQ9NZM4 1560 aa38.22■■■■□ 3.71
SWI5-201ENST00000320188 SHROOM4Q9ULL8 1493 aa37.78■■■■□ 3.64
SWI5-201ENST00000320188 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
SWI5-201ENST00000320188 DCAF1Q9Y4B6 1507 aa37.7■■■■□ 3.63
SWI5-201ENST00000320188 CC2D2AQ9P2K1 1620 aa37.56■■■■□ 3.6
SWI5-201ENST00000320188 SCRIBQ14160 1630 aa37.51■■■■□ 3.6
SWI5-201ENST00000320188 CECR2Q9BXF3 1484 aa37.49■■■■□ 3.59
SWI5-201ENST00000320188 EIF4G1Q04637 1599 aaKnown RBP37.37■■■■□ 3.57
SWI5-201ENST00000320188 DNAJC5Q9H3Z4 198 aa36.4■■■■□ 3.42
SWI5-201ENST00000320188 CUX2O14529 1486 aa36.05■■■■□ 3.36
SWI5-201ENST00000320188 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
SWI5-201ENST00000320188 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
SWI5-201ENST00000320188 ATAD2BQ9ULI0 1458 aa35.81■■■■□ 3.32
SWI5-201ENST00000320188 SMARCA2P51531 1590 aa35.78■■■■□ 3.32
SWI5-201ENST00000320188 HMGXB3Q12766 1538 aa35.76■■■■□ 3.31
SWI5-201ENST00000320188 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
SWI5-201ENST00000320188 NESP48681 1621 aa35.54■■■■□ 3.28
SWI5-201ENST00000320188 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.27
SWI5-201ENST00000320188 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
SWI5-201ENST00000320188 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
SWI5-201ENST00000320188 THOC2Q8NI27 1593 aaKnown RBP35.36■■■■□ 3.25
SWI5-201ENST00000320188 LAMC3Q9Y6N6 1575 aa35.34■■■■□ 3.25
SWI5-201ENST00000320188 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
SWI5-201ENST00000320188 MROH2BQ7Z745 1585 aa35.12■■■■□ 3.21
SWI5-201ENST00000320188 PDS5BQ9NTI5 1447 aa35.11■■■■□ 3.21
SWI5-201ENST00000320188 CADPSQ9ULU8 1353 aa34.86■■■■□ 3.17
SWI5-201ENST00000320188 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
SWI5-201ENST00000320188 WDR62O43379 1518 aa34.77■■■■□ 3.16
SWI5-201ENST00000320188 WIZO95785 1651 aa34.73■■■■□ 3.15
SWI5-201ENST00000320188 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
SWI5-201ENST00000320188 CEP164Q9UPV0 1460 aa34.62■■■■□ 3.13
SWI5-201ENST00000320188 FANCD2Q9BXW9 1451 aa34.51■■■■□ 3.11
SWI5-201ENST00000320188 CFTRP13569 1480 aa34.39■■■■□ 3.1
SWI5-201ENST00000320188 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
SWI5-201ENST00000320188 OSCARQ8IYS5 282 aa34.26■■■■□ 3.08
SWI5-201ENST00000320188 PRDM2Q13029 1718 aa34.23■■■■□ 3.07
SWI5-201ENST00000320188 URB2Q14146 1524 aaKnown RBP34.22■■■■□ 3.07
SWI5-201ENST00000320188 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
SWI5-201ENST00000320188 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
SWI5-201ENST00000320188 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
SWI5-201ENST00000320188 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
SWI5-201ENST00000320188 IFT140Q96RY7 1462 aa33.94■■■■□ 3.02
SWI5-201ENST00000320188 ZNF608Q9ULD9 1512 aaPredicted RBP33.85■■■■□ 3.01
SWI5-201ENST00000320188 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
SWI5-201ENST00000320188 TOPBP1Q92547 1522 aa33.8■■■■□ 3
SWI5-201ENST00000320188 ARHGEF11O15085 1522 aa33.76■■■■□ 3
SWI5-201ENST00000320188 ABCC8Q09428 1581 aa33.76■■■□□ 2.99
SWI5-201ENST00000320188 EIF4G3O43432 1585 aaKnown RBP33.75■■■□□ 2.99
SWI5-201ENST00000320188 DNMBPQ6XZF7 1577 aa33.69■■■□□ 2.98
SWI5-201ENST00000320188 CHD1O14646 1710 aa33.63■■■□□ 2.97
SWI5-201ENST00000320188 TARBP1Q13395 1621 aaKnown RBP33.55■■■□□ 2.96
SWI5-201ENST00000320188 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.953e-7■■■□□ 17
SWI5-201ENST00000320188 CYB5RLQ6IPT4 315 aa33.46■■■□□ 2.95
SWI5-201ENST00000320188 POLA1P09884 1462 aaPredicted RBP33.42■■■□□ 2.94
SWI5-201ENST00000320188 FBLN2P98095 1184 aa33.38■■■□□ 2.93
SWI5-201ENST00000320188 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
SWI5-201ENST00000320188 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
SWI5-201ENST00000320188 TRHP20396 242 aaPredicted RBP33.28■■■□□ 2.92
SWI5-201ENST00000320188 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.92
SWI5-201ENST00000320188 SOGA1O94964 1423 aa33.24■■■□□ 2.91
SWI5-201ENST00000320188 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
SWI5-201ENST00000320188 TDRD9Q8NDG6 1382 aaKnown RBP33.19■■■□□ 2.9
SWI5-201ENST00000320188 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
SWI5-201ENST00000320188 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
SWI5-201ENST00000320188 CLASP1Q7Z460 1538 aa33.14■■■□□ 2.9
SWI5-201ENST00000320188 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
SWI5-201ENST00000320188 CHMP7Q8WUX9 453 aaPredicted RBP33.07■■■□□ 2.88
SWI5-201ENST00000320188 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
SWI5-201ENST00000320188 CUX1P39880 1505 aa33.04■■■□□ 2.88
SWI5-201ENST00000320188 PBRM1Q86U86 1689 aa33■■■□□ 2.87
SWI5-201ENST00000320188 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
SWI5-201ENST00000320188 GAPVD1Q14C86 1478 aa32.86■■■□□ 2.85
SWI5-201ENST00000320188 ABCA5Q8WWZ7 1642 aa32.8■■■□□ 2.84
SWI5-201ENST00000320188 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
SWI5-201ENST00000320188 AEBP2Q6ZN18 517 aaPredicted RBP32.68■■■□□ 2.82
SWI5-201ENST00000320188 GRIN2AQ12879 1464 aa32.61■■■□□ 2.81
SWI5-201ENST00000320188 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
SWI5-201ENST00000320188 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.85e-6■■■■■ 29.2
SWI5-201ENST00000320188 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
SWI5-201ENST00000320188 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
SWI5-201ENST00000320188 NUP160Q12769 1436 aa32.5■■■□□ 2.79
SWI5-201ENST00000320188 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
SWI5-201ENST00000320188 SHROOM2Q13796 1616 aa32.47■■■□□ 2.79
SWI5-201ENST00000320188 TOP2BQ02880 1626 aa32.45■■■□□ 2.79
SWI5-201ENST00000320188 FHAD1B1AJZ9 1412 aa32.43■■■□□ 2.78
SWI5-201ENST00000320188 ERICH3Q5RHP9 1530 aa32.38■■■□□ 2.77
SWI5-201ENST00000320188 SUPT5HO00267 1087 aaKnown RBP32.35■■■□□ 2.77
SWI5-201ENST00000320188 KIF13AQ9H1H9 1805 aa32.33■■■□□ 2.77
SWI5-201ENST00000320188 PRG4Q92954 1404 aaPredicted RBP32.22■■■□□ 2.75
SWI5-201ENST00000320188 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms