Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AP001271.2-201ENST00000624018 1556 ntBASIC17.15■□□□□ 0.34
CDH20Q9HBT6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC073648.6-201ENST00000641589 218 ntBASIC17.15■□□□□ 0.34
CDH20Q9HBT6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC018553.1-201ENST00000616682 1458 ntBASIC17.15■□□□□ 0.34
CDH20Q9HBT6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 TCF3P1-201ENST00000423021 1937 ntBASIC17.15■□□□□ 0.34
CDH20Q9HBT6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
CDH20Q9HBT6 AC116351.2-201ENST00000606540 1585 ntBASIC17.15■□□□□ 0.34
CDH20Q9HBT6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDH20Q9HBT6 AL691432.2-201ENST00000607222 2038 ntBASIC17.14■□□□□ 0.34
CDH20Q9HBT6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH20Q9HBT6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 AC128676.1-201ENST00000454392 318 ntBASIC17.14■□□□□ 0.33
CDH20Q9HBT6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH20Q9HBT6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 AC112907.3-201ENST00000577781 2400 ntBASIC17.13■□□□□ 0.33
CDH20Q9HBT6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH20Q9HBT6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms