Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL2P13500 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL2P13500 TMEM179-206ENST00000616017 1645 ntBASIC17.11■□□□□ 0.33
CCL2P13500 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCL2P13500 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.11■□□□□ 0.33
CCL2P13500 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 AL121829.2-201ENST00000620908 328 ntBASIC17.11■□□□□ 0.33
CCL2P13500 AL023875.1-201ENST00000640777 796 ntBASIC17.11■□□□□ 0.33
CCL2P13500 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL2P13500 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCL2P13500 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL2P13500 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCL2P13500 AC009237.14-201ENST00000609975 1594 ntBASIC17.11■□□□□ 0.33
CCL2P13500 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL2P13500 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCL2P13500 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL2P13500 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL2P13500 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL2P13500 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 MTDHP1-201ENST00000605323 784 ntBASIC17.1■□□□□ 0.33
CCL2P13500 ITM2C-210ENST00000620962 501 ntBASIC17.1■□□□□ 0.33
CCL2P13500 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL2P13500 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CCL2P13500 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCL2P13500 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL2P13500 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCL2P13500 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 AL158211.5-201ENST00000623583 2518 ntBASIC17.09■□□□□ 0.33
CCL2P13500 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCL2P13500 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 PRKY-204ENST00000533551 1019 ntBASIC17.09■□□□□ 0.33
CCL2P13500 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL2P13500 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL2P13500 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.09■□□□□ 0.33
CCL2P13500 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL2P13500 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL2P13500 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL2P13500 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL2P13500 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCL2P13500 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL2P13500 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL2P13500 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.08■□□□□ 0.33
CCL2P13500 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL2P13500 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CCL2P13500 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.33
CCL2P13500 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL2P13500 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL2P13500 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCL2P13500 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL2P13500 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCL2P13500 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL2P13500 AP006587.1-201ENST00000534129 1502 ntBASIC17.08■□□□□ 0.32
CCL2P13500 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 PRORSD1P-201ENST00000295112 541 ntBASIC17.08■□□□□ 0.32
CCL2P13500 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCL2P13500 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL2P13500 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.08■□□□□ 0.32
CCL2P13500 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.08■□□□□ 0.32
CCL2P13500 C1QBPP2-201ENST00000528754 825 ntBASIC17.08■□□□□ 0.32
CCL2P13500 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CCL2P13500 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL2P13500 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL2P13500 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.08■□□□□ 0.32
CCL2P13500 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCL2P13500 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms