Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 AL512408.1-201ENST00000569378 2000 ntBASIC21.69■■□□□ 1.06
COL1A2P08123 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
COL1A2P08123 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 B3GAT3P1-201ENST00000471720 806 ntBASIC21.69■■□□□ 1.06
COL1A2P08123 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.69■■□□□ 1.06
COL1A2P08123 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.69■■□□□ 1.06
COL1A2P08123 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.69■■□□□ 1.06
COL1A2P08123 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.69■■□□□ 1.06
COL1A2P08123 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A2P08123 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
COL1A2P08123 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL1A2P08123 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 AL137060.1-201ENST00000618151 2648 ntBASIC21.68■■□□□ 1.06
COL1A2P08123 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 MIR1238-201ENST00000408483 83 ntBASIC21.68■■□□□ 1.06
COL1A2P08123 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
COL1A2P08123 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.68■■□□□ 1.06
COL1A2P08123 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.68■■□□□ 1.06
COL1A2P08123 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COL1A2P08123 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COL1A2P08123 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A2P08123 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.67■■□□□ 1.06
COL1A2P08123 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A2P08123 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A2P08123 FEM1AP1-201ENST00000431297 1995 ntBASIC21.67■■□□□ 1.06
COL1A2P08123 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A2P08123 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL1A2P08123 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A2P08123 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A2P08123 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL1A2P08123 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.66■■□□□ 1.06
COL1A2P08123 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 KRT8P9-201ENST00000558927 1449 ntBASIC21.66■■□□□ 1.06
COL1A2P08123 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COL1A2P08123 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.66■■□□□ 1.06
COL1A2P08123 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.66■■□□□ 1.06
COL1A2P08123 AC145285.6-201ENST00000604632 637 ntBASIC21.66■■□□□ 1.06
COL1A2P08123 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.66■■□□□ 1.06
COL1A2P08123 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COL1A2P08123 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.66■■□□□ 1.06
COL1A2P08123 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A2P08123 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A2P08123 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL1A2P08123 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A2P08123 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A2P08123 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL1A2P08123 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A2P08123 AC009237.14-201ENST00000609975 1594 ntBASIC21.65■■□□□ 1.06
COL1A2P08123 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.65■■□□□ 1.06
COL1A2P08123 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A2P08123 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
COL1A2P08123 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A2P08123 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.64■■□□□ 1.06
COL1A2P08123 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 AL390955.1-201ENST00000428694 934 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms