Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT78Q8N1N4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 AC092368.3-202ENST00000574180 1591 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 AC060766.5-201ENST00000590539 871 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 AC083880.1-201ENST00000608266 535 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 PHGDH-210ENST00000641115 1638 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 AP001271.2-201ENST00000624018 1556 ntBASIC19.1■□□□□ 0.65
KRT78Q8N1N4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KRT78Q8N1N4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT78Q8N1N4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
KRT78Q8N1N4 AC009237.14-201ENST00000609975 1594 ntBASIC19.08■□□□□ 0.65
KRT78Q8N1N4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT78Q8N1N4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 PNMA6B-201ENST00000538162 1200 ntBASIC19.07■□□□□ 0.64
KRT78Q8N1N4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 AC006557.6-201ENST00000623071 864 ntBASIC19.07■□□□□ 0.64
KRT78Q8N1N4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT78Q8N1N4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms