Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 RNA5SP413-201ENST00000516373 109 ntBASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 TCF3P1-201ENST00000423021 1937 ntBASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PPARGC1BQ86YN6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 AC073210.2-201ENST00000430369 194 ntBASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 MIR4651-201ENST00000582622 73 ntBASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PPARGC1BQ86YN6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
PPARGC1BQ86YN6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC31.19■■■□□ 2.58
PPARGC1BQ86YN6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 BX119927.1-201ENST00000636596 1552 ntBASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
PPARGC1BQ86YN6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 AC092368.3-202ENST00000574180 1591 ntBASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPARGC1BQ86YN6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 KRT8P17-201ENST00000453110 1448 ntBASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 KRT18P6-201ENST00000555540 1265 ntBASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 LBX2-AS1-202ENST00000603175 2083 ntBASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PPARGC1BQ86YN6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms