Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.24■□□□□ 0.67
SNAP47Q5SQN1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.24■□□□□ 0.67
SNAP47Q5SQN1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAP47Q5SQN1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.24■□□□□ 0.67
SNAP47Q5SQN1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAP47Q5SQN1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 AL121829.2-201ENST00000620908 328 ntBASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 AC006128.1-201ENST00000624704 1661 ntBASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 AC005229.4-201ENST00000610085 2198 ntBASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAP47Q5SQN1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 AP001412.1-201ENST00000608405 714 ntBASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 AL135905.2-201ENST00000584934 1404 ntBASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
SNAP47Q5SQN1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 AL121906.2-201ENST00000621597 723 ntBASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SNAP47Q5SQN1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 KRT8P20-201ENST00000423953 1409 ntBASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 DPP3P2-201ENST00000416030 1696 ntBASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNAP47Q5SQN1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 PTBP1P-201ENST00000554374 1601 ntBASIC19.19■□□□□ 0.66
SNAP47Q5SQN1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms