Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.8■■□□□ 1.08
COL1A2P08123 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL1A2P08123 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL1A2P08123 RBM17P1-201ENST00000453646 1190 ntBASIC21.8■■□□□ 1.08
COL1A2P08123 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.8■■□□□ 1.08
COL1A2P08123 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL1A2P08123 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL1A2P08123 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.8■■□□□ 1.08
COL1A2P08123 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.79■■□□□ 1.08
COL1A2P08123 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.79■■□□□ 1.08
COL1A2P08123 AP001271.2-201ENST00000624018 1556 ntBASIC21.79■■□□□ 1.08
COL1A2P08123 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.79■■□□□ 1.08
COL1A2P08123 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.79■■□□□ 1.08
COL1A2P08123 AL031985.4-201ENST00000642138 673 ntBASIC21.79■■□□□ 1.08
COL1A2P08123 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL1A2P08123 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL1A2P08123 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.78■■□□□ 1.08
COL1A2P08123 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.78■■□□□ 1.08
COL1A2P08123 UNC93B2-201ENST00000285383 730 ntBASIC21.78■■□□□ 1.08
COL1A2P08123 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL1A2P08123 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL1A2P08123 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL1A2P08123 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.78■■□□□ 1.08
COL1A2P08123 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
COL1A2P08123 AC012306.2-201ENST00000609350 630 ntBASIC21.78■■□□□ 1.08
COL1A2P08123 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL1A2P08123 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
COL1A2P08123 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL1A2P08123 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
COL1A2P08123 MMP23A-201ENST00000234610 1017 ntBASIC21.77■■□□□ 1.08
COL1A2P08123 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.77■■□□□ 1.08
COL1A2P08123 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.77■■□□□ 1.08
COL1A2P08123 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.77■■□□□ 1.08
COL1A2P08123 AC097493.4-201ENST00000641197 219 ntBASIC21.77■■□□□ 1.08
COL1A2P08123 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
COL1A2P08123 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 AP005212.1-201ENST00000581547 1997 ntBASIC21.77■■□□□ 1.08
COL1A2P08123 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.77■■□□□ 1.08
COL1A2P08123 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.77■■□□□ 1.08
COL1A2P08123 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
COL1A2P08123 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL1A2P08123 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.77■■□□□ 1.07
COL1A2P08123 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.76■■□□□ 1.07
COL1A2P08123 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL1A2P08123 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL1A2P08123 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.76■■□□□ 1.07
COL1A2P08123 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.76■■□□□ 1.07
COL1A2P08123 AC133561.5-201ENST00000635547 218 ntBASIC21.76■■□□□ 1.07
COL1A2P08123 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL1A2P08123 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL1A2P08123 AC073314.1-201ENST00000568729 2216 ntBASIC21.76■■□□□ 1.07
COL1A2P08123 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.76■■□□□ 1.07
COL1A2P08123 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL1A2P08123 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.75■■□□□ 1.07
COL1A2P08123 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.75■■□□□ 1.07
COL1A2P08123 AC079598.2-202ENST00000546624 1451 ntBASIC21.75■■□□□ 1.07
COL1A2P08123 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.75■■□□□ 1.07
COL1A2P08123 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.75■■□□□ 1.07
COL1A2P08123 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.75■■□□□ 1.07
COL1A2P08123 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.75■■□□□ 1.07
COL1A2P08123 TMEM179-206ENST00000616017 1645 ntBASIC21.75■■□□□ 1.07
COL1A2P08123 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.75■■□□□ 1.07
COL1A2P08123 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
COL1A2P08123 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.75■■□□□ 1.07
COL1A2P08123 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL1A2P08123 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COL1A2P08123 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL1A2P08123 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.74■■□□□ 1.07
COL1A2P08123 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.74■■□□□ 1.07
COL1A2P08123 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.74■■□□□ 1.07
COL1A2P08123 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COL1A2P08123 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL1A2P08123 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL1A2P08123 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms