Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 AL355802.2-201ENST00000402069 882 ntBASIC17.16■□□□□ 0.34
SFTPBP07988 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.16■□□□□ 0.34
SFTPBP07988 AC083906.2-201ENST00000511578 360 ntBASIC17.16■□□□□ 0.34
SFTPBP07988 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 AL591742.1-201ENST00000604433 565 ntBASIC17.16■□□□□ 0.34
SFTPBP07988 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.16■□□□□ 0.34
SFTPBP07988 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SFTPBP07988 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.16■□□□□ 0.34
SFTPBP07988 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.15■□□□□ 0.34
SFTPBP07988 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 AL121832.2-201ENST00000610979 668 ntBASIC17.15■□□□□ 0.34
SFTPBP07988 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.15■□□□□ 0.34
SFTPBP07988 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SFTPBP07988 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.15■□□□□ 0.34
SFTPBP07988 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 AC068338.2-201ENST00000563278 1430 ntBASIC17.14■□□□□ 0.33
SFTPBP07988 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SFTPBP07988 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SFTPBP07988 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SFTPBP07988 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.14■□□□□ 0.33
SFTPBP07988 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SFTPBP07988 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SFTPBP07988 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SFTPBP07988 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 CYP2T1P-201ENST00000432607 1285 ntBASIC17.13■□□□□ 0.33
SFTPBP07988 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.13■□□□□ 0.33
SFTPBP07988 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.13■□□□□ 0.33
SFTPBP07988 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms