Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC018553.1-201ENST00000616682 1458 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 ECEL1P2-202ENST00000465689 757 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 DUX4L26-201ENST00000489078 1255 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AL445675.2-201ENST00000620291 557 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AC006011.2-201ENST00000621313 1158 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AC006128.1-201ENST00000624704 1661 ntBASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHAC2Q9Y5I4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 AC004980.1-204ENST00000429707 299 ntBASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHAC2Q9Y5I4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 AC007225.1-201ENST00000566331 1836 ntBASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 WWOX-216ENST00000569818 525 ntBASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHAC2Q9Y5I4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 AC008040.2-201ENST00000461049 708 ntBASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHAC2Q9Y5I4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 FSCN1P1-201ENST00000568912 1481 ntBASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHAC2Q9Y5I4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 LINC00565-201ENST00000562710 2331 ntBASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 KRT18P16-201ENST00000510337 1294 ntBASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 596 ms