Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
BEST4Q8NFU0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BEST4Q8NFU0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 TREX1-205ENST00000625293 1783 ntBASIC17.08■□□□□ 0.33
BEST4Q8NFU0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
BEST4Q8NFU0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.08■□□□□ 0.32
BEST4Q8NFU0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BEST4Q8NFU0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 AL691432.2-201ENST00000607222 2038 ntBASIC17.07■□□□□ 0.32
BEST4Q8NFU0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 HCG11-201ENST00000411553 5696 ntBASIC17.07■□□□□ 0.32
BEST4Q8NFU0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BEST4Q8NFU0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 KRT16P2-201ENST00000414673 1423 ntBASIC17.06■□□□□ 0.32
BEST4Q8NFU0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST4Q8NFU0 AC116050.2-201ENST00000612102 1779 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms