Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 AL032819.2-201ENST00000624543 2162 ntBASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 AC104187.1-201ENST00000607510 612 ntBASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 LINC01465-201ENST00000408887 1940 ntBASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 SLC7A5P1-201ENST00000568957 537 ntBASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM56-RWDD3S4R434 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AC097381.1-201ENST00000429019 1296 ntBASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 CDV3P1-201ENST00000471403 739 ntBASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TMEM56-RWDD3S4R434 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TMEM56-RWDD3S4R434 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms