Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 tM(CAU)Q2tM(CAU)Q2 78 nt-5.3□□□□□ -3.26
RKR1Q04781 YHR180C-BYHR180C-B 105 nt-5.3□□□□□ -3.26
RKR1Q04781 YJR157WYJR157W 363 nt-5.3□□□□□ -3.26
RKR1Q04781 YLR406C-AYLR406C-A 150 nt-5.3□□□□□ -3.26
RKR1Q04781 YPR012WYPR012W 255 nt-5.32□□□□□ -3.26
RKR1Q04781 YOL013W-BYOL013W-B 291 nt-5.34□□□□□ -3.26
RKR1Q04781 snR41snR41 95 nt-5.34□□□□□ -3.26
RKR1Q04781 snR73snR73 106 nt-5.37□□□□□ -3.27
RKR1Q04781 YJL150WYJL150W 303 nt-5.42□□□□□ -3.28
RKR1Q04781 snR80snR80 171 nt-5.44□□□□□ -3.28
RKR1Q04781 ATP6Q0085 780 nt-5.5□□□□□ -3.29
RKR1Q04781 YKL106C-AYKL106C-A 120 nt-5.51□□□□□ -3.29
RKR1Q04781 YLR299C-AYLR299C-A 93 nt-5.54□□□□□ -3.3
RKR1Q04781 YOR335W-AYOR335W-A 81 nt-5.55□□□□□ -3.3
RKR1Q04781 YOR381W-AYOR381W-A 168 nt-5.55□□□□□ -3.3
RKR1Q04781 YJL136W-AYJL136W-A 84 nt-5.61□□□□□ -3.31
RKR1Q04781 snR34snR34 203 nt-5.62□□□□□ -3.31
RKR1Q04781 RPL41BYDL133C-A 78 nt-5.63□□□□□ -3.31
RKR1Q04781 YAL016C-BYAL016C-B 186 nt-5.64□□□□□ -3.31
RKR1Q04781 snR78snR78 87 nt-5.74□□□□□ -3.33
RKR1Q04781 snR60snR60 104 nt-5.76□□□□□ -3.33
RKR1Q04781 YDR413CYDR413C 576 nt-5.77□□□□□ -3.33
RKR1Q04781 YNL324WYNL324W 396 nt-5.78□□□□□ -3.33
RKR1Q04781 YNL028WYNL028W 318 nt-5.82□□□□□ -3.34
RKR1Q04781 YOR329W-AYOR329W-A 210 nt-5.85□□□□□ -3.35
RKR1Q04781 snR54snR54 86 nt-5.88□□□□□ -3.35
RKR1Q04781 YGL041CYGL041C 204 nt-5.89□□□□□ -3.35
RKR1Q04781 Q0255Q0255 1419 nt-5.96□□□□□ -3.36
RKR1Q04781 snR87snR87 109 nt-5.97□□□□□ -3.36
RKR1Q04781 YMR001C-AYMR001C-A 231 nt-5.97□□□□□ -3.37
RKR1Q04781 YEL014CYEL014C 306 nt-6.03□□□□□ -3.37
RKR1Q04781 YLR120W-AYLR120W-A 102 nt-6.06□□□□□ -3.38
RKR1Q04781 YLR222C-AYLR222C-A 231 nt-6.09□□□□□ -3.38
RKR1Q04781 YBR109W-AYBR109W-A 225 nt-6.09□□□□□ -3.38
RKR1Q04781 YER006C-AYER006C-A 318 nt-6.1□□□□□ -3.39
RKR1Q04781 YLR434CYLR434C 384 nt-6.16□□□□□ -3.4
RKR1Q04781 YGR035CYGR035C 351 nt-6.22□□□□□ -3.4
RKR1Q04781 YOR102WYOR102W 351 nt-6.26□□□□□ -3.41
RKR1Q04781 HTL1YCR020W-B 237 nt-6.35□□□□□ -3.43
RKR1Q04781 tW(UCA)QtW(UCA)Q 74 nt-6.38□□□□□ -3.43
RKR1Q04781 YBR296C-AYBR296C-A 120 nt-6.45□□□□□ -3.44
RKR1Q04781 RPL41AYDL184C 78 nt-6.46□□□□□ -3.44
RKR1Q04781 YDR406W-AYDR406W-A 246 nt-6.48□□□□□ -3.45
RKR1Q04781 YGL188C-AYGL188C-A 141 nt-6.58□□□□□ -3.46
RKR1Q04781 YNL097C-BYNL097C-B 123 nt-6.59□□□□□ -3.46
RKR1Q04781 snR38snR38 95 nt-6.6□□□□□ -3.47
RKR1Q04781 YBL100W-CYBL100W-C 120 nt-6.61□□□□□ -3.47
RKR1Q04781 snR48snR48 113 nt-6.63□□□□□ -3.47
RKR1Q04781 YKL118WYKL118W 312 nt-6.65□□□□□ -3.47
RKR1Q04781 snR85snR85 171 nt-6.67□□□□□ -3.48
RKR1Q04781 YLR412C-AYLR412C-A 207 nt-6.69□□□□□ -3.48
RKR1Q04781 YAL066WYAL066W 309 nt-6.7□□□□□ -3.48
RKR1Q04781 YBR131C-AYBR131C-A 90 nt-6.7□□□□□ -3.48
RKR1Q04781 GIM4YEL003W 336 nt-6.76□□□□□ -3.49
RKR1Q04781 snR56snR56 88 nt-6.78□□□□□ -3.5
RKR1Q04781 tV(UAC)QtV(UAC)Q 76 nt-6.82□□□□□ -3.5
RKR1Q04781 tL(UAA)QtL(UAA)Q 85 nt-6.86□□□□□ -3.51
RKR1Q04781 tF(GAA)QtF(GAA)Q 75 nt-6.88□□□□□ -3.51
RKR1Q04781 YCR095W-AYCR095W-A 159 nt-6.99□□□□□ -3.53
RKR1Q04781 YDL114W-AYDL114W-A 114 nt-6.99□□□□□ -3.53
RKR1Q04781 snR58snR58 96 nt-7.03□□□□□ -3.54
RKR1Q04781 YNL170WYNL170W 396 nt-7.04□□□□□ -3.54
RKR1Q04781 YNL122CYNL122C 348 nt-7.08□□□□□ -3.54
RKR1Q04781 YDR157WYDR157W 402 nt-7.11□□□□□ -3.55
RKR1Q04781 YAL063C-AYAL063C-A 291 nt-7.11□□□□□ -3.55
RKR1Q04781 YDR183C-AYDR183C-A 258 nt-7.12□□□□□ -3.55
RKR1Q04781 RPL39YJL189W 156 nt-7.14□□□□□ -3.55
RKR1Q04781 YDR118W-AYDR118W-A 117 nt-7.17□□□□□ -3.56
RKR1Q04781 YPL038W-AYPL038W-A 192 nt-7.17□□□□□ -3.56
RKR1Q04781 YJL047C-AYJL047C-A 135 nt-7.23□□□□□ -3.57
RKR1Q04781 YKL096C-BYKL096C-B 150 nt-7.35□□□□□ -3.59
RKR1Q04781 YKL123WYKL123W 381 nt-7.39□□□□□ -3.59
RKR1Q04781 YOL164W-AYOL164W-A 183 nt-7.48□□□□□ -3.61
RKR1Q04781 YHL015W-AYHL015W-A 84 nt-7.55□□□□□ -3.62
RKR1Q04781 YBL071C-BYBL071C-B 99 nt-7.57□□□□□ -3.62
RKR1Q04781 snR47snR47 99 nt-7.58□□□□□ -3.62
RKR1Q04781 YBL053WYBL053W 375 nt-7.62□□□□□ -3.63
RKR1Q04781 SOM1YEL059C-A 225 nt-7.63□□□□□ -3.63
RKR1Q04781 YDL159W-AYDL159W-A 132 nt-7.7□□□□□ -3.64
RKR1Q04781 SPG3YDR504C 384 nt-7.75□□□□□ -3.65
RKR1Q04781 snR52snR52 92 nt-7.77□□□□□ -3.65
RKR1Q04781 YHR175W-AYHR175W-A 150 nt-7.79□□□□□ -3.66
RKR1Q04781 YKL225WYKL225W 348 nt-7.82□□□□□ -3.66
RKR1Q04781 YGR151CYGR151C 336 nt-7.85□□□□□ -3.67
RKR1Q04781 YOR302WYOR302W 78 nt-7.87□□□□□ -3.67
RKR1Q04781 YLR285C-AYLR285C-A 171 nt-7.94□□□□□ -3.68
RKR1Q04781 YNL277W-AYNL277W-A 189 nt-7.99□□□□□ -3.69
RKR1Q04781 Q0143Q0143 153 nt-8.07□□□□□ -3.7
RKR1Q04781 YEL050W-AYEL050W-A 192 nt-8.08□□□□□ -3.7
RKR1Q04781 YAL037C-AYAL037C-A 93 nt-8.18□□□□□ -3.72
RKR1Q04781 tS(GCU)Q1tS(GCU)Q1 86 nt-8.22□□□□□ -3.72
RKR1Q04781 YDR034C-AYDR034C-A 177 nt-8.26□□□□□ -3.73
RKR1Q04781 YGR122C-AYGR122C-A 129 nt-8.3□□□□□ -3.74
RKR1Q04781 tC(GCA)QtC(GCA)Q 76 nt-8.36□□□□□ -3.75
RKR1Q04781 YNR025CYNR025C 360 nt-8.39□□□□□ -3.75
RKR1Q04781 YDL240C-AYDL240C-A 138 nt-8.8□□□□□ -3.82
RKR1Q04781 YPL152W-AYPL152W-A 99 nt-8.96□□□□□ -3.84
RKR1Q04781 YGL007C-AYGL007C-A 87 nt-9.06□□□□□ -3.86
RKR1Q04781 YOR225WYOR225W 330 nt-9.1□□□□□ -3.87
RKR1Q04781 snR40snR40 97 nt-9.21□□□□□ -3.88
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms